RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 DNAJC25-GNG10A0A024R161 153 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 A0A087WZ62 844 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 GPR25O00155 361 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ZNF286BP0CG31 522 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 VDRP11473 427 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ETS1P14921 441 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 SCTRP47872 440 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 RAD23BP54727 409 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PDIA2Q13087 525 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TMEM132DQ14C87 1099 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TMEM63BQ5T3F8 832 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TXNRD3NBQ6F5E7 133 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 JADE1Q6IE81 842 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CAPN12Q6ZSI9 719 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 C1orf127Q8N9H9 656 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ACTL9Q8TC94 416 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 FDXACB1Q9BRP7 624 aaPredicted RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 BCO2Q9BYV7 579 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 VTA1Q9NP79 307 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 MCF2LO15068 1137 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ARL4CP56559 192 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 POU5F1BQ06416 359 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ADCY1Q08828 1119 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ORC1Q13415 861 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 ACAP1Q15027 740 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 SEPT7Q16181 437 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 HIF1AQ16665 826 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 HP1BP3Q5SSJ5 553 aaPredicted RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 FAM102AQ5T9C2 384 aaPredicted RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CWF19L1Q69YN2 538 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 VSTM1Q6UX27 236 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 EMC1Q8N766 993 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 OR6J1Q8NGC5 347 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 JOSD2Q8TAC2 188 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 HSPH1Q92598 858 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 HPDLQ96IR7 371 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 NFKBIZQ9BYH8 718 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 FAM49AQ9H0Q0 323 aaPredicted RBP10.09□□□□□ -0.79
COL6A3-204ENST00000392003 RNPEPQ9H4A4 650 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 SMYD3Q9H7B4 428 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 MINDY3Q9H8M7 445 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 FGFR1OP2Q9NVK5 253 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 SENP1Q9P0U3 644 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 CPA4Q9UI42 421 aa10.09□□□□□ -0.79
COL6A3-204ENST00000392003 LOC285556D6RIA3 1793 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 DYTNA2CJ06 578 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 MAP3K13O43283 966 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 LRCH4O75427 683 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 C22orf31O95567 290 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 LGALS2P05162 132 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 MYCLP1P12525 358 aaPredicted RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 CREB1P16220 341 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 ATP2A2P16615 1042 aaKnown RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 KDELR1P24390 212 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 CLCN2P51788 898 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 RBP5P82980 135 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 OASLQ15646 514 aaKnown RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 KCNT1Q5JUK3 1230 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 OR6B2Q6IFH4 312 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SLC30A9Q6PML9 568 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 BBS12Q6ZW61 710 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 IQCF2Q8IXL9 164 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 PPIL6Q8IXY8 311 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 CCT6BQ92526 530 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SMC6Q96SB8 1091 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 UBN1Q9NPG3 1134 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 KLC4Q9NSK0 619 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SIX4Q9UIU6 781 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 DYNC1LI2O43237 492 aaPredicted RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 MICAL2O94851 1124 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 ZNF157P51786 506 aaPredicted RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 INHBCP55103 352 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 TSNAXIP1Q2TAA8 658 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SMUG1Q53HV7 270 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 TMEM192Q8IY95 271 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 GLIS1Q8NBF1 620 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 PYROXD1Q8WU10 500 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 MRRFQ96E11 262 aaKnown RBP10.08□□□□□ -0.8
COL6A3-204ENST00000392003 FGD4Q96M96 766 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 AGAP3Q96P47 875 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 ACAP3Q96P50 834 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SLC40A1Q9NP59 571 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 H3BRB1 525 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 GOLGA8MH3BSY2 632 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 SNX3O60493 162 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 HMGCRP04035 888 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 GSTA1P08263 222 aa10.08□□□□□ -0.8
COL6A3-204ENST00000392003 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms