RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 FBXO32Q969P5 355 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 C8orf33Q9H7E9 229 aaPredicted RBP13.42□□□□□ -0.26
GGPS1-203ENST00000391855 LTB4R2Q9NPC1 389 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 IL37Q9NZH6 218 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 ARHGAP26Q9UNA1 814 aa13.42□□□□□ -0.26
GGPS1-203ENST00000391855 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 TNFRSF10BO14763 440 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-203ENST00000391855 LRRN2O75325 713 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 OLFM2O95897 454 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 ADORA2BP29275 332 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 TUBP50607 506 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 SLC8A3P57103 927 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 USP4Q13107 963 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 CC2D1AQ6P1N0 951 aaPredicted RBP13.41□□□□□ -0.26
GGPS1-203ENST00000391855 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 ZMIZ2Q8NF64 920 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 TATDN2Q93075 761 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
GGPS1-203ENST00000391855 FAM81BQ96LP2 452 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 KCNK16Q96T55 309 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 SMOQ99835 787 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 ARID3AQ99856 593 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 HEBP1Q9NRV9 189 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 GCNT4Q9P109 453 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 RAPGEFL1Q9UHV5 662 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 SIT1Q9Y3P8 196 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 PIAS3Q9Y6X2 628 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 ZDBF2Q9HCK1 2354 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
GGPS1-203ENST00000391855 HDCP19113 662 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 RAD23BP54727 409 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 MAP3K7CLP57077 242 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 SLC7A9P82251 487 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 GCNT1Q02742 428 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 IFRD2Q12894 506 aaPredicted RBP13.4□□□□□ -0.26
GGPS1-203ENST00000391855 PDGFRLQ15198 375 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 SNX30Q5VWJ9 437 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 CLEC20AQ6ZU45 233 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
GGPS1-203ENST00000391855 SLC4A11Q8NBS3 891 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 JAKMIP2Q96AA8 810 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 HEXIM2Q96MH2 286 aaKnown RBP13.4□□□□□ -0.26
GGPS1-203ENST00000391855 IER2Q9BTL4 223 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 KIAA1257Q9ULG3 409 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 ANAPC1Q9H1A4 1944 aa13.4□□□□□ -0.26
GGPS1-203ENST00000391855 ZNF638Q14966 1978 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 OAS1P00973 400 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 PLA2G5P39877 138 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 AMPD2Q01433 879 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 MTF1Q14872 753 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 UBXN2BQ14CS0 331 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 STILQ15468 1287 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 ZNF77Q15935 545 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 IER5LQ5T953 404 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 ENOSF1Q7L5Y1 443 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 PPM1KQ8N3J5 372 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 UBR7Q8N806 425 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 DTWD2Q8NBA8 298 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 EHBP1Q8NDI1 1231 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 GPT2Q8TD30 523 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 FAM122AQ96E09 287 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 LRRC3BQ96PB8 259 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 SMG9Q9H0W8 520 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 TLR8Q9NR97 1041 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 TICRRQ7Z2Z1 1910 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 HELZP42694 1942 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 GTPBP10A4D1E9 387 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 PI15O43692 258 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 PAEPP09466 180 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 ZDHHC11BP0C7U3 371 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 VDRP11473 427 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
GGPS1-203ENST00000391855 IFNAR2P48551 515 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 PSEN1P49768 467 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 BCAT1P54687 386 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 LRMPQ12912 555 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 ITPRIPL2Q3MIP1 535 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 SGO2Q562F6 1265 aa13.39□□□□□ -0.27
GGPS1-203ENST00000391855 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms