RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 ZNF548Q8NEK5 533 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 OSR1Q8TAX0 266 aaPredicted RBP3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SLC35A4Q96G79 324 aa3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TMEM184CQ9NVA4 438 aa3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TFCP2L1Q9NZI6 479 aa3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PCDHA6Q9UN73 950 aa3.82□□□□□ -1.8
RNU6-1009P-201ENST00000390996 H3BUI4 141 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 GCATO75600 419 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 MT-CO3P00414 261 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CRYABP02511 175 aaKnown RBP3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 APEHP13798 732 aaKnown RBP3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CDK11BP21127 795 aaKnown RBP3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 UCP3P55916 312 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 WNT3P56703 355 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TMTC4Q5T4D3 741 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 UBAP2Q5T6F2 1119 aaKnown RBP3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PELI3Q8N2H9 469 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SIRT6Q8N6T7 355 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CCDC17Q96LX7 622 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 DPCDQ9BVM2 203 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 POT1Q9NUX5 634 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 MED16Q9Y2X0 877 aa3.81□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CYSRT1A8MQ03 144 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CYP2C9P11712 490 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 GKP32189 559 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 RECQLP46063 649 aaPredicted RBP3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SLC11A2P49281 568 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 LARS2Q15031 903 aaKnown RBP3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PGS1Q32NB8 556 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 GAS2L3Q86XJ1 694 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ARFGAP1Q8N6T3 406 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CTHRC1Q96CG8 243 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 MRGPRX1Q96LB2 322 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PPP1R10Q96QC0 940 aaKnown RBP3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 HIPK2Q9H2X6 1198 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ZBTB40Q9NUA8 1239 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TRMT13Q9NUP7 481 aaKnown RBP3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PI4KBQ9UBF8 816 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TMX2Q9Y320 296 aa3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-1009P-201ENST00000390996 A0A087WWL8 130 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 H3BNX3 289 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PMPCBO75439 489 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CTSAP10619 480 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PHKG2P15735 406 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ATF7P17544 494 aaPredicted RBP3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ME1P48163 572 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ID2Q02363 134 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 LMAN2Q12907 356 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 C4orf46Q504U0 113 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 KHDC1LQ5JSQ8 128 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CATIPQ7Z7H3 387 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PLBD2Q8NHP8 589 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ZFYVE19Q96K21 471 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 CTAGE1Q96RT6 745 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 C17orf80Q9BSJ5 609 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 GTPBP4Q9BZE4 634 aaKnown RBP3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 GAR1Q9NY12 217 aaKnown RBP3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 LPAR3Q9UBY5 353 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SQORQ9Y6N5 450 aa3.79□□□□□ -1.8
RNU6-1009P-201ENST00000390996 M0R3H8 397 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 RNF8O76064 485 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 THP07101 528 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 FGF2P09038 288 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TNFRSF1BP20333 461 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 DIO1P49895 249 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 COPB1P53618 953 aaKnown RBP3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SATB1Q01826 763 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 MGAT5BQ3V5L5 792 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TMEM240Q5SV17 173 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PTCHD4Q6ZW05 846 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 WIPF2Q8TF74 440 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 TMEM171Q8WVE6 324 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SPC25Q9HBM1 224 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 SARS2Q9NP81 518 aaKnown RBP3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ZNF112Q9UJU3 913 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 PROCRQ9UNN8 238 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 HS3ST3B1Q9Y662 390 aa3.78□□□□□ -1.8
RNU6-1009P-201ENST00000390996 B4DGG1 531 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 PRSS44E7EML9 344 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 CES2O00748 559 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 TULP3O75386 442 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 XRCC6P12956 609 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 ARFIP2P53365 341 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 SUMO2P61956 95 aaKnown RBP3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 KRT17Q04695 432 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 FAM50AQ14320 339 aaKnown RBP3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 MLC1Q15049 377 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 NPY5RQ15761 445 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 COLCA1Q6ZS62 124 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 PIM3Q86V86 326 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 ANKRD13BQ86YJ7 626 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 PRPF38AQ8NAV1 312 aaKnown RBP3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 BPIFB1Q8TDL5 484 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 MVB12AQ96EY5 273 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 CDK5RAP3Q96JB5 506 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 TRMOQ9BU70 441 aa3.77□□□□□ -1.81
RNU6-1009P-201ENST00000390996 FAM234AQ9H0X4 552 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms