RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 HPS3Q969F9 1004 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 PPP2R3CQ969Q6 453 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 REPS1Q96D71 796 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 VPS50Q96JG6 964 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF668Q96K58 619 aaPredicted RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 AIFM3Q96NN9 605 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 MMS19Q96T76 1030 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 CGRRF1Q99675 332 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 BRIP1Q9BX63 1249 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 GTPBP4Q9BZE4 634 aaKnown RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF518BQ9C0D4 1074 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 MS4A7Q9GZW8 240 aaPredicted RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 FAM204AQ9H8W3 233 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 TCF7L1Q9HCS4 588 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 TRIM36Q9NQ86 728 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 TYW1Q9NV66 732 aaKnown RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 MRPS18AQ9NVS2 196 aaKnown RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 DDX56Q9NY93 547 aaKnown RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 HDAC9Q9UKV0 1011 aa1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 COL3A1P02461 1466 aaPredicted RBP1.63□□□□□ -2.15
SNORD28B-201ENST00000390993 CADPSQ9ULU8 1353 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 A0A087WWL8 130 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 LOC102723971A0A1B0GUV8 181 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ANKRD62A6NC57 917 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 FAM90A10PA6NDY2 464 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 AQP7P3A6NL99 342 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 H3BML4 177 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 hCG_1984214I3L0E3 225 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 BTN3A1O00481 513 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TP73O15350 636 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 CCP110O43303 1012 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 KCNAB3O43448 404 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 MGEA5O60502 916 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 SRGAP2O75044 1071 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PMPCBO75439 489 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 BCAR3O75815 825 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 OAZ2O95190 189 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PDE8BO95263 885 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TOP3BO95985 862 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 MT-CO3P00414 261 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 FGAP02671 866 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 SLC3A2P08195 630 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 T-ENOLP0DO92 83 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TGFB3P10600 412 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 CYP2A6P11509 494 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 CREB1P16220 341 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 KCNA3P22001 575 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PCSK6P29122 969 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ADORA2AP29274 412 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TACR3P29371 465 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 GKP32189 559 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ME1P48163 572 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TOB1P50616 345 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 COPB1P53618 953 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 BCAT1P54687 386 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 RPS13P62277 151 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 IGBP1P78318 339 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TXNL4AP83876 142 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 HSF1Q00613 529 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF91Q05481 1191 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PIN1Q13526 163 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 RAPGEF1Q13905 1077 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 BOP1Q14137 746 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 DAZAP2Q15038 168 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 LRRC41Q15345 812 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 GPR162Q16538 588 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PFKFB3Q16875 520 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ANO6Q4KMQ2 910 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 BRDTQ58F21 947 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ATAT1Q5SQI0 421 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 FCRL6Q6DN72 434 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF517Q6ZMY9 492 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ZNF66Q6ZN08 573 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 DCDC5Q6ZRR9 648 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 ANKRD13BQ86YJ7 626 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 YAF2Q8IY57 180 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 C9orf106Q8NAJ2 232 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 MPLKIPQ8TAP9 179 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 DIS3LQ8TF46 1054 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TMEM171Q8WVE6 324 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 RAPGEF4Q8WZA2 1011 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PMM1Q92871 262 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 SPSB4Q96A44 273 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 HOOK2Q96ED9 719 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 THOC3Q96J01 351 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 HIC2Q96JB3 615 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 RITA1Q96K30 269 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 MESP1Q9BRJ9 268 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 WACQ9BTA9 647 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 TRMOQ9BU70 441 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 EFHD1Q9BUP0 239 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 CINPQ9BW66 212 aaPredicted RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 VN1R3Q9BXE9 311 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 VPS33BQ9H267 617 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 EBF3Q9H4W6 596 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 CXorf36Q9H7Y0 433 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 A1CFQ9NQ94 594 aaKnown RBP1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 PDGFCQ9NRA1 345 aa1.62□□□□□ -2.15
SNORD28B-201ENST00000390993 KLHL13Q9P2N7 655 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms