RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 WDR4P57081 412 aaKnown RBP13.23□□□□□ -0.29
PUDP-201ENST00000381077 ROR1Q01973 937 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 HAUS1Q96CS2 278 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 ZNF670Q9BS34 389 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 C16orf70Q9BSU1 422 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
PUDP-201ENST00000381077 RRN3P2A6NIE6 340 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 ZNF189O75820 626 aaPredicted RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 GJB1P08034 283 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 ZFXP17010 805 aaPredicted RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 NDST1P52848 882 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 GPX6P59796 221 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 FASTKD3Q14CZ7 662 aaKnown RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 SMTNL2Q2TAL5 461 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 ARHGAP17Q68EM7 881 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 TMEM110Q86TL2 294 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PRUNE1Q86TP1 453 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 FBF1Q8TES7 1133 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 RNF157Q96PX1 679 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 CYTH2Q99418 400 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 GOLGB1Q14789 3259 aaKnown RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 IQANK1A0A1B0GTG1 560 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 BCLAF3A2AJT9 711 aaKnown RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 DCTN3O75935 186 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 CYP2C8P10632 490 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 CCNB1P14635 433 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PDGFRAP16234 1089 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 GCLCP48506 637 aaPredicted RBP13.22□□□□□ -0.29
PUDP-201ENST00000381077 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 C3orf62Q6ZUJ4 267 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PALM2Q8IXS6 379 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 EMC1Q8N766 993 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 VPS11Q9H270 941 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PDGFCQ9NRA1 345 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 ABCF3Q9NUQ8 709 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 GTF2IRD1Q9UHL9 959 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 USH1CQ9Y6N9 552 aa13.22□□□□□ -0.29
PUDP-201ENST00000381077 PLXNB2O15031 1838 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 UBOX5O94941 541 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 AXLP30530 894 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 GDF10P55107 478 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 CDH6P55285 790 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 PPARDQ03181 441 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 KCNJ11Q14654 390 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 SLC9A4Q6AI14 798 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 CYP4V2Q6ZWL3 525 aaPredicted RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 RXFP2Q8WXD0 754 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 CALN1Q9BXU9 219 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 TXLNGQ9NUQ3 528 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.29
PUDP-201ENST00000381077 XPO7Q9UIA9 1087 aaKnown RBP13.21□□□□□ -0.29
PUDP-201ENST00000381077 H3BRB1 525 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 EDF1O60869 148 aaKnown RBP13.21□□□□□ -0.3
PUDP-201ENST00000381077 IL1BP01584 269 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 ALADP13716 330 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 CA4P22748 312 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 MSH2P43246 934 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 PTPN9P43378 593 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 NCALDP61601 193 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 DYNLT1P63172 113 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.3
PUDP-201ENST00000381077 SETDB1Q15047 1291 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 OR6B2Q6IFH4 312 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 FAM183BPQ6ZVS7 135 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 UNC45BQ8IWX7 931 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 MCUQ8NE86 351 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 FBXO36Q8NEA4 188 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 NLRP7Q8WX94 980 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 HSPH1Q92598 858 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 ACSF2Q96CM8 615 aaPredicted RBP13.21□□□□□ -0.3
PUDP-201ENST00000381077 KIF12Q96FN5 646 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 PAFAH2Q99487 392 aa13.21□□□□□ -0.3
PUDP-201ENST00000381077 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.3
PUDP-201ENST00000381077 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms