RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ANO7Q6IWH7 933 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 DENND1BQ6P3S1 775 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 CEP128Q6ZU80 1094 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 SERAC1Q96JX3 654 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
NKX3-1-201ENST00000380871 A0A087WZ62 844 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 AVILO75366 819 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 LRCH4O75427 683 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 ZWINTO95229 277 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 SERPINB3P29508 390 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 PTPN20Q4JDL3 420 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 BANPQ8N9N5 519 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 ATP11CQ8NB49 1132 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 FDXACB1Q9BRP7 624 aaPredicted RBP17■□□□□ 0.31
NKX3-1-201ENST00000380871 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM155BO75949 473 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 TNNC2P02585 160 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 LINGO3P0C6S8 592 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 INSRRP14616 1297 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PTPN4P29074 926 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PCK1P35558 622 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ADGRD1Q6QNK2 874 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PPIL6Q8IXY8 311 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 UBR7Q8N806 425 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 LRRN4Q8WUT4 740 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM111AQ96PZ2 611 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ACSS3Q9H6R3 686 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 MANSC1Q9H8J5 431 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 XPO7Q9UIA9 1087 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 A0A0G2JLL6 359 aaPredicted RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ASS1P00966 412 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 CALB1P05937 261 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ARL4CP56559 192 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 NPNTQ6UXI9 565 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 RFX8Q6ZV50 586 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PRRT2Q7Z6L0 340 aaPredicted RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 PALM2Q8IXS6 379 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 TTC17Q96AE7 1141 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 FGD4Q96M96 766 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ARMCX1Q9P291 453 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 LRRC42Q9Y546 428 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 RLFQ13129 1914 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 NFICP08651 508 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 EDNRBP24530 442 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 EFNA5P52803 228 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 RAB6CQ53S08 254 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 LRRC38Q5VT99 294 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 RSAD2Q8WXG1 361 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 RAB6CQ9H0N0 254 aa16.99■□□□□ 0.31
NKX3-1-201ENST00000380871 ENO4A6NNW6 628 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 E5RJQ4 531 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 TGFB3P10600 412 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 BGNP21810 368 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 MPHOSPH6Q99547 160 aaKnown RBP16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 DHRS4Q9BTZ2 278 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 NIF3L1Q9GZT8 377 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 RPF1Q9H9Y2 349 aaKnown RBP16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 DPPA5A6NC42 116 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 GPR25O00155 361 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 KRT36O76013 467 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 ITGB3P05106 788 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 TROVE2P10155 538 aaKnown RBP eCLIP16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 CPA2P48052 419 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 PIGHQ14442 188 aaPredicted RBP16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 CDCA2Q69YH5 1023 aaPredicted RBP16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 C4orf50Q6ZRC1 276 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 AFG1LQ8WV93 481 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 HSPH1Q92598 858 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 FAM167AQ96KS9 214 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 KCNK13Q9HB14 408 aa16.98■□□□□ 0.31
NKX3-1-201ENST00000380871 ZBTB42B2RXF5 422 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 OSBPP22059 807 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ELK3P41970 407 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ENPEPQ07075 957 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 FAAP100Q0VG06 881 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 MMRN1Q13201 1228 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 KPNB1Q14974 876 aaKnown RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ZC3H18Q86VM9 953 aaKnown RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ENDOVQ8N8Q3 282 aaKnown RBP16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 DTX3LQ8TDB6 740 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ANKRD36BP1Q96IX9 119 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 TSSK1BQ9BXA7 367 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 TMEM120AQ9BXJ8 343 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 LPXNO60711 386 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 MAP3K6O95382 1288 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ADCYAP1R1P41586 468 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 KBTBD12Q3ZCT8 623 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 ZPBP2Q6X784 338 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 RINLQ6ZS11 566 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
NKX3-1-201ENST00000380871 UBA3Q8TBC4 463 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms