RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ATF2P15336 505 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ITIH2P19823 946 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 IL32P24001 234 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 EIF3EP60228 445 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 CHRNEQ04844 493 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 CDK18Q07002 472 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 NME3Q13232 169 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 AARS2Q5JTZ9 985 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 IRF2BP2Q7Z5L9 587 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 AKAP14Q86UN6 197 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 HPS6Q86YV9 775 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ZDHHC14Q8IZN3 488 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 KBTBD7Q8WVZ9 684 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 TRUB1Q8WWH5 349 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RMDN1Q96DB5 314 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RIOK1Q9BRS2 568 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ZNF717Q9BY31 904 aaPredicted RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 MOV10Q9HCE1 1003 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 STMN3Q9NZ72 180 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 MARCOQ9UEW3 520 aaPredicted RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 PACSIN3Q9UKS6 424 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 COL4A3BPQ9Y5P4 624 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 H6PDO95479 791 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DLATP10515 647 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 OXA1LQ15070 435 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 LSM12Q3MHD2 195 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 PPP6R3Q5H9R7 873 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 SLC10A5Q5PT55 438 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 LLGL2Q6P1M3 1020 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 OTOP3Q7RTS5 596 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SNX29P2Q8IUI4 249 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 RTKN2Q8IZC4 609 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ADAMTS16Q8TE57 1224 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 RMND5BQ96G75 393 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 FAM20AQ96MK3 541 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 CDK5RAP1Q96SZ6 601 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 GCOM2Q9BZD3 368 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 DCLK3Q9C098 648 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 COPS7BQ9H9Q2 264 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 C8orf4Q9NR00 106 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 GDAP2Q9NXN4 497 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SNTG2Q9NY99 539 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 KCNN3Q9UGI6 736 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZNF229Q9UJW7 825 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 CACNA1FO60840 1977 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DIP2AQ14689 1571 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ARHGEF37A1IGU5 675 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 B4GALT4O60513 344 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 KRT6AP02538 564 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 PROCP04070 461 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 KRT6BP04259 564 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DLDP09622 509 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 CCDC159P0C7I6 412 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 PCP11498 1178 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 KRT3P12035 628 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 COL6A1P12109 1028 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZNF182P17025 639 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 BGNP21810 368 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 MAP4P27816 1152 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 ECE1P42892 770 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 RFX5P48382 616 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 AMPD3Q01432 767 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 UBAP2LQ14157 1087 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 GCKRQ14397 625 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 NFE2Q16621 373 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 NRF1Q16656 503 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ATAD3BQ5T9A4 648 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 LMBR1LQ6UX01 489 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZNF598Q86UK7 904 aaKnown RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 CATSPER3Q86XQ3 398 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SPARTQ8N0X7 666 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 TCP10LQ8TDR4 215 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 MAP6Q96JE9 813 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 FEM1CQ96JP0 617 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 FRMD8Q9BZ67 464 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 HOXD1Q9GZZ0 328 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 CCSER2Q9H7U1 834 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 CXorf21Q9HAI6 301 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ABI2Q9NYB9 513 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 WHRNQ9P202 907 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SLC17A7Q9P2U7 560 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 POMPQ9Y244 141 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 HOXC11O43248 304 aaPredicted RBP8.83□□□□□ -1
NHLRC3-201ENST00000379599 MFN2O95140 757 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 CSF1RP07333 972 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 GFAPP14136 432 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SLC9A1P19634 815 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 STAT3P40763 770 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DSTNP60981 165 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 ZBED5Q49AG3 693 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 PXDC1Q5TGL8 231 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 SLC30A10Q6XR72 485 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 RNF207Q6ZRF8 634 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 PRR23BQ6ZRT6 265 aa8.83□□□□□ -1
NHLRC3-201ENST00000379599 DCP2Q8IU60 420 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms