RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 MAN2B1O00754 1011 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 CEP104O60308 925 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ASGR2P07307 311 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ERVK-10P10266 1014 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 SLC2A3P11169 496 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GNA15P30679 374 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PSEN1P49768 467 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GJA9P57773 515 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF284Q2VY69 593 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 C10orf76Q5T2E6 689 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 SH3BP5LQ7L8J4 393 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 UHMK1Q8TAS1 419 aaKnown RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GMLQ99445 158 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 CDX2Q99626 313 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 C11orf70Q9BRQ4 267 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 CFAP97Q9P2B7 532 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GIT1Q9Y2X7 761 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GFPT2O94808 682 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 RTN3O95197 1032 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PXNP49023 591 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PDE1BQ01064 536 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 SP2Q02086 613 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 APBA1Q02410 837 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 WDR45BQ5MNZ6 344 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 TBC1D19Q8N5T2 526 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 OR6P1Q8NGX9 317 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 SPATA20Q8TB22 786 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 UBLCP1Q8WVY7 318 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ARHGEF26Q96DR7 871 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 LRRC1Q9BTT6 524 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GPR88Q9GZN0 384 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 KLC4Q9NSK0 619 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PSD3Q9NYI0 1048 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF148Q9UQR1 794 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PDS5AQ29RF7 1337 aaKnown RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 TTC28Q96AY4 2481 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 A0A1W2PRU2 124 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SYNDIG1LA6NDD5 238 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 DCXO43602 365 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SYF2O95926 243 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 EPB42P16452 691 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 HOXB8P17481 243 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PBLDP30039 288 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 SREBF1P36956 1147 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MAN2A1Q16706 1144 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TATDN1Q6P1N9 297 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MARK2Q7KZI7 788 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 FBXL18Q96ME1 805 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KRT12Q99456 494 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ADAM7Q9H2U9 754 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MRPL47Q9HD33 250 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 HSPBP1Q9NZL4 362 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MAD2L2Q9UI95 211 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CEP250Q9BV73 2442 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KATNA1O75449 491 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 GJB5O95377 273 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KRT14P02533 472 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ITGAVP06756 1048 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MYZAPP0CAP1 466 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NOS2P35228 1153 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PTK2BQ14289 1009 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 DDR2Q16832 855 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ZC2HC1CQ53FD0 456 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 FAM46CQ5VWP2 391 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 APTXQ7Z2E3 356 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CATSPER3Q86XQ3 398 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 FBXL13Q8NEE6 735 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 COG1Q8WTW3 980 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 RAD54LQ92698 747 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PRCCQ92733 491 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CYFIP2Q96F07 1278 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PPP1R16AQ96I34 528 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MS4A14Q96JA4 679 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 UROC1Q96N76 676 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 FOPNLQ96NB1 174 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 NELL2Q99435 816 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 MTMR12Q9C0I1 747 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 EPB41L5Q9HCM4 733 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.82□□□□□ -1.324e-7■■■■■ 41
NEDD9-202ENST00000379446 MARF1Q9Y4F3 1742 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CUL9Q8IWT3 2517 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 A0A1W2PQC6 194 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 UBA6A0AVT1 1052 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 E5RI56 91 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KRIT1O00522 736 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 ACKR2O00590 384 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KCNK3O14649 394 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 AXIN1O15169 862 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 INPP4BO15327 924 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 KIF1CO43896 1103 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 RHOBTB3O94955 611 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 OR4Q2P0C623 313 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 JMJD7P0C870 316 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 DARSP14868 501 aaKnown RBP6.82□□□□□ -1.32
NEDD9-202ENST00000379446 CD72P21854 359 aa6.82□□□□□ -1.32
NEDD9-202ENST00000379446 RBMS1P29558 406 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms