RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MMP13P45452 471 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 FCGRTP55899 365 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 GUCY1A3Q02108 690 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TMEM62Q0P6H9 643 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TFDP2Q14188 446 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TRIP13Q15645 432 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 P3H1Q32P28 736 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 SV2CQ496J9 727 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 FAM47CQ5HY64 1035 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 FBXO47Q5MNV8 452 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 FAM183BPQ6ZVS7 135 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 B4GALNT4Q76KP1 1039 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TMEM110Q86TL2 294 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 ARFGAP1Q8N6T3 406 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 KCTD6Q8NC69 237 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 DNAJB3Q8WWF6 145 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 ZMAT2Q96NC0 199 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TBCBQ99426 244 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 MRPL45Q9BRJ2 306 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 CRISPLD2Q9H0B8 497 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 ZWILCHQ9H900 591 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 CDHR5Q9HBB8 845 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 PAK6Q9NQU5 681 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 TUBGCP4Q9UGJ1 667 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 PIN4Q9Y237 131 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 GINS2Q9Y248 185 aa10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 ATXN2Q99700 1313 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-201ENST00000379340 SCN1AP35498 2009 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 ZNF487B1APH4 448 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 E5RJQ4 531 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 NDUFAB1O14561 156 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 ENDOD1O94919 500 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 PFKMP08237 780 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 IL1R2P27930 398 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 MAGEA10P43363 369 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 TAF6P49848 677 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 ARSEP51690 589 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 SLC6A3Q01959 620 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 AUHQ13825 339 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 STAT4Q14765 748 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 PDK2Q15119 407 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 FSCN1Q16658 493 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 BOLA3Q53S33 107 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 PPP1R26Q5T8A7 1209 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 DPH6Q7L8W6 267 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 ARCQ7LC44 396 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 NLRP14Q86W24 1093 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 MAP7D3Q8IWC1 876 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 CRYBG2Q8N1P7 616 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 EMC1Q8N766 993 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 TEKT4Q8WW24 435 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 RXFP2Q8WXD0 754 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 NXF3Q9H4D5 531 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 PPCSQ9HAB8 311 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 NINJ2Q9NZG7 142 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 RSPH14Q9UHP6 348 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 GGA2Q9UJY4 613 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 DOCK3Q8IZD9 2030 aa10.97□□□□□ -0.65
POLR2J3-201ENST00000379340 TTC28Q96AY4 2481 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TLDC2A0PJX2 215 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 A8MXQ7 604 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 M0QZ92 97 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TREHO43280 583 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 PRPSAP2O60256 369 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 CST8O60676 142 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 DUSP11O75319 330 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 FAM107AO95990 144 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 PDGFRAP16234 1089 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 CYP2B6P20813 491 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 ACADSBP45954 432 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 VPS41P49754 854 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 BCAT1P54687 386 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 PURAQ00577 322 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 OTUD4Q01804 1114 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 PLCB3Q01970 1234 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 BST2Q10589 180 aaKnown RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 KCTD19Q17RG1 926 aaPredicted RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 LRIT3Q3SXY7 679 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 UBXN11Q5T124 520 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TTC19Q6DKK2 380 aaPredicted RBP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 OLFML1Q6UWY5 402 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 LIMS2Q7Z4I7 341 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 RFX6Q8HWS3 928 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TMEM130Q8N3G9 435 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 TOP6BLQ8N6T0 577 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 C7orf31Q8N865 590 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 OR6B3Q8NGW1 331 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 ACTL9Q8TC94 416 aa10.96□□□□□ -0.65
POLR2J3-201ENST00000379340 SLC35F5Q8WV83 523 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms