RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 USP29Q9HBJ7 922 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 RNF103-CHMP3A0A140T963 221 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 B8ZZF3 427 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 C2CD2LO14523 706 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 FCHO1O14526 889 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 FOSP01100 380 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 PBX1P40424 430 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 CYP2J2P51589 502 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 AQP4P55087 323 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 ZFP69Q49AA0 526 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 TEDDM1Q5T9Z0 273 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 DPP8Q6V1X1 898 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 STK32CQ86UX6 486 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 ING2Q9H160 280 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 SMARCAD1Q9H4L7 1026 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 A0A1W2PRG6 482 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 USP17L3A6NCW0 530 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 USP17L4A6NCW7 530 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 J3QRK9 145 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 RIPK2O43353 540 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 ITM2AO43736 263 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 NOS1APO75052 506 aaPredicted RBP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 COL6A2P12110 1019 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 CRABP2P29373 138 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 TXNRD1Q16881 649 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 C5orf22Q49AR2 442 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 MEI1Q5TIA1 1274 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 METTL13Q8N6R0 699 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 AZIN2Q96A70 460 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 FBXL8Q96CD0 374 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 QKIQ96PU8 341 aaKnown RBP eCLIP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 WDR12Q9GZL7 423 aaKnown RBP12.21□□□□□ -0.46
NPHP4-202ENST00000378161 PARVAQ9NVD7 372 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 PCDHA1Q9Y5I3 950 aa12.21□□□□□ -0.46
NPHP4-202ENST00000378161 SYNGAP1Q96PV0 1343 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 DIP2BQ9P265 1576 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 AXIN1O15169 862 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 ZNF862O60290 1169 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GIT2Q14161 759 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 IL23RQ5VWK5 629 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GALNT18Q6P9A2 607 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 C3orf62Q6ZUJ4 267 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 AHI1Q8N157 1196 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 RDH13Q8NBN7 331 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 IARS2Q9NSE4 1012 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GDAP2Q9NXN4 497 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CAPN8A6NHC0 703 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 NADKO95544 446 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CES1P23141 567 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 ATP2B4P23634 1241 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GRK2P25098 689 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 NPTX2P47972 431 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 FAPQ12884 760 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GNA13Q14344 377 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 FAM182BQ5T319 152 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 PLEKHM3Q6ZWE6 761 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 KBTBD2Q8IY47 623 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CACTIN-AS1Q8N1I8 211 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 PJA1Q8NG27 643 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 EPB41L4AQ9HCS5 686 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 S100A14Q9HCY8 104 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 INPP5FQ9Y2H2 1132 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 KLHL20Q9Y2M5 609 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 TK2O00142 265 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 DGKIO75912 1065 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 S100A9P06702 114 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CCNA2P20248 432 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 NCOA4Q13772 614 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 PHKG1Q16816 387 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GPR107Q5VW38 600 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
NPHP4-202ENST00000378161 TICAM1Q8IUC6 712 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 ALDH16A1Q8IZ83 802 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 NATD1Q8N6N6 113 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 GLG1Q92896 1179 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 TBATAQ96M53 351 aa12.2□□□□□ -0.46
NPHP4-202ENST00000378161 CNPY3Q9BT09 278 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms