RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-202ENST00000377865 GORASP1Q9BQQ3 440 aa9.1□□□□□ -0.95
PCDH9-202ENST00000377865 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
PCDH9-202ENST00000377865 KRT82Q9NSB4 513 aa9.1□□□□□ -0.95
PCDH9-202ENST00000377865 AURKCQ9UQB9 309 aa9.1□□□□□ -0.95
PCDH9-202ENST00000377865 TNPO2O14787 897 aaKnown RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 TIMM44O43615 452 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 RALBP11234 206 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 GSTT1P30711 240 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 STAT5BP51692 787 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CCNA1P78396 465 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 FMO1Q01740 532 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 IER5Q5VY09 327 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 C6orf89Q6UWU4 347 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 AGR3Q8TD06 166 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ECSITQ9BQ95 431 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 NACA2Q9H009 215 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ARHGEF3Q9NR81 526 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CHADO15335 359 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 NR3C2P08235 984 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ANPEPP15144 967 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ELK3P41970 407 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 GCLCP48506 637 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CHN2P52757 468 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 PPATQ06203 517 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 POU5F1BQ06416 359 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 TMEM132DQ14C87 1099 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ECM1Q16610 540 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 B3GNT6Q6ZMB0 384 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CROCCP3Q8IVE0 287 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 DLG3Q92796 817 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 NT5C1AQ9BXI3 368 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 F5H423 210 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 VDRP11473 427 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 TPI1P60174 286 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 PRKG1Q13976 671 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CIAPIN1Q6FI81 312 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 RWDD4Q6NW29 188 aaKnown RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 MARK2Q7KZI7 788 aaKnown RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 RYBPQ8N488 228 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 RNF149Q8NC42 400 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 DDHD1Q8NEL9 900 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ACTL9Q8TC94 416 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 NMD3Q96D46 503 aaKnown RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CEP19Q96LK0 163 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 POP1Q99575 1024 aaKnown RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 VTI1BQ9UEU0 232 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 USP18Q9UMW8 372 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 C3orf70A6NLC5 250 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 SNX2O60749 519 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ATP6V1B1P15313 513 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 RAG1P15918 1043 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 TTC33Q6PID6 262 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 SHC3Q92529 594 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 EXT2Q93063 718 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 MKL1Q969V6 931 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 CCDC126Q96EE4 140 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 TNIP3Q96KP6 325 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 EPAS1Q99814 870 aa9.09□□□□□ -0.95
PCDH9-202ENST00000377865 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-202ENST00000377865 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SPATA31A5Q5VU36 1347 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SPATA31A7Q8IWB4 1347 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 RPTORQ8N122 1335 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 EEF2KO00418 725 aaKnown RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ATP9BO43861 1147 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 FAM200BP0CF97 657 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ADORA2BP29275 332 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PPARGP37231 505 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 MARCKSL1P49006 195 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CDK7P50613 346 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KRT72Q14CN4 511 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CYP1B1Q16678 543 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 GOLGA7BQ2TAP0 167 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 SEL1L3Q68CR1 1132 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 MFSD7Q6UXD7 560 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 LINC00523Q86TU6 105 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TXNRD3Q86VQ6 643 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TDRPQ86YL5 185 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ALG3Q92685 438 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 ATXN7L3BQ96GX2 97 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 EBF2Q9HAK2 575 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 NMRK1Q9NWW6 199 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 RHBDL2Q9NX52 303 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 LOC100653049A0A140TA62 436 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 EML1O00423 815 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 XPO1O14980 1071 aaKnown RBP9.08□□□□□ -0.96
PCDH9-202ENST00000377865 BIRC5O15392 142 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 TBC1D4O60343 1298 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 MAN1A2O60476 641 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 KRT34O76011 436 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 RARRES1P49788 294 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 GTF2BQ00403 316 aa9.08□□□□□ -0.96
PCDH9-202ENST00000377865 PTP4A2Q12974 167 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms