RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 MLXIPLQ9NP71 852 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 RNF146Q9NTX7 359 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 UMODL1Q5DID0 1318 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 GOLGA8IPA6NC78 632 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 GOLGA8JA6NMD2 632 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 NFKBIEO00221 500 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 ZNF862O60290 1169 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 S100BP04271 92 aaPredicted RBP16.18■□□□□ 0.18
FXN-201ENST00000377270 PCSK6P29122 969 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 PHBP35232 272 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 CCDC81Q6ZN84 652 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 C4orf50Q6ZRC1 276 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 C12orf56Q8IXR9 622 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 KCNK9Q9NPC2 374 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
FXN-201ENST00000377270 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 PARP2Q9UGN5 583 aa16.18■□□□□ 0.18
FXN-201ENST00000377270 CDK2AP1O14519 115 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 RARGP13631 454 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 CREB1P16220 341 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
FXN-201ENST00000377270 SFNP31947 248 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 AP3M2P53677 418 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 KRT76Q01546 638 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 COL19A1Q14993 1142 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 RASA2Q15283 850 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 IZUMO2Q6UXV1 221 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ARHGEF19Q8IW93 802 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ERP27Q96DN0 273 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 TCF12Q99081 682 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 FER1L6Q2WGJ9 1857 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 TMCC2O75069 709 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 TFPTP0C1Z6 253 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ATP5DP30049 168 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 BACE1P56817 501 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 C1orf220Q5T0J3 134 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ADAT2Q7Z6V5 191 aaKnown RBP16.17■□□□□ 0.18
FXN-201ENST00000377270 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
FXN-201ENST00000377270 SUN5Q8TC36 379 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 RFFLQ8WZ73 363 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 SLC7A6OSQ96CW6 309 aaPredicted RBP16.17■□□□□ 0.18
FXN-201ENST00000377270 MAGEB18Q96M61 343 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 KLHL4Q9C0H6 718 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ST6GALNAC4Q9H4F1 302 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 SATB2Q9UPW6 733 aa16.17■□□□□ 0.18
FXN-201ENST00000377270 ARHGAP33O14559 1287 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 PGM3O95394 542 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 RFX1P22670 979 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 MARK3P27448 753 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 STX2P32856 288 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 KPNA1P52294 538 aaPredicted RBP16.16■□□□□ 0.18
FXN-201ENST00000377270 POLGP54098 1239 aaPredicted RBP16.16■□□□□ 0.18
FXN-201ENST00000377270 NCKAP1LP55160 1127 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 SEPT6Q14141 434 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 BOLA3Q53S33 107 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 NLRX1Q86UT6 975 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 OR7G1Q8NGA0 311 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 TMEM174Q8WUU8 243 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 VMP1Q96GC9 406 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 RUNDC3BQ96NL0 473 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 AGPAT1Q99943 283 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 TRNAU1APQ9NX07 287 aaKnown RBP16.16■□□□□ 0.18
FXN-201ENST00000377270 FZD1Q9UP38 647 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 TELO2Q9Y4R8 837 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 TMEM114B3SHH9 223 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 PSMG1O95456 288 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 NR3C2P08235 984 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 ENO2P09104 434 aaPredicted RBP16.16■□□□□ 0.18
FXN-201ENST00000377270 CETN2P41208 172 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 RASSF2P50749 326 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 LONRF1Q17RB8 773 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 EPC2Q52LR7 807 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 DCAF12L1Q5VU92 463 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 DSTYKQ6XUX3 929 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 ACMSDQ8TDX5 336 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 ARHGEF26Q96DR7 871 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 KIFC3Q9BVG8 833 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 THAP2Q9H0W7 228 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 EHD1Q9H4M9 534 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 CNGB3Q9NQW8 809 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 UTRNP46939 3433 aa16.16■□□□□ 0.18
FXN-201ENST00000377270 A0A088AWK7 358 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 ANKRD63C9JTQ0 380 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 DDX3YO15523 660 aaKnown RBP16.15■□□□□ 0.18
FXN-201ENST00000377270 GH1P01241 217 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 FDX1P10109 184 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 PTPN2P17706 415 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 CCND2P30279 289 aa16.15■□□□□ 0.18
FXN-201ENST00000377270 RPL21P46778 160 aaKnown RBP16.15■□□□□ 0.18
FXN-201ENST00000377270 YARSP54577 528 aaKnown RBP16.15■□□□□ 0.18
FXN-201ENST00000377270 DSG1Q02413 1049 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms