RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 WARS2Q9UGM6 360 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 DCAF8L1A6NGE4 600 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SUPT3HB4E1H0 165 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 TM9SF1O15321 606 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 RAG1P15918 1043 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 RXRBP28702 533 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 TAS2R40P59535 323 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FMO1Q01740 532 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 COBLL1Q53SF7 1204 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CERS5Q8N5B7 392 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SNRNP27Q8WVK2 155 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PGM2Q96G03 612 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 IARS2Q9NSE4 1012 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 DONSONQ9NYP3 566 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FAM198AQ9UFP1 575 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 BAG5Q9UL15 447 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ZMYM2Q9UBW7 1377 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 UBR2Q8IWV8 1755 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 KLHL2O95198 593 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 HNRNPH3P31942 346 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 YTHDF3Q7Z739 585 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FBXO16Q8IX29 292 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SCFD2Q8WU76 684 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PTPRN2Q92932 1015 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 EME1Q96AY2 570 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 NT5C1AQ9BXI3 368 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 RNF19AQ9NV58 838 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CYP39A1Q9NYL5 469 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 BAG6P46379 1132 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 N4BP2L1Q5TBK1 243 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 OR6J1Q8NGC5 347 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 OR6P1Q8NGX9 317 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 IL31RAQ8NI17 732 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF669Q96BR6 464 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CENPTQ96BT3 561 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CMTM5Q96DZ9 223 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 MRPL1Q9BYD6 325 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CCDC90BQ9GZT6 254 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 KIF17Q9P2E2 1029 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 VAV3Q9UKW4 847 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 STAP1Q9ULZ2 295 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SPDYE2BA6NHP3 402 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FCHO1O14526 889 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SPDYE6P0CI01 402 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CLCN3P51790 818 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CRADDP78560 199 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CPNE8Q86YQ8 564 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CATSPER2Q96P56 530 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FHDC1Q9C0D6 1143 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 C12orf65Q9H3J6 166 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ARHGEF38Q9NXL2 777 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 AFF4Q9UHB7 1163 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ADGRA3Q8IWK6 1321 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PFDN6O15212 129 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 AVILO75366 819 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CHEK2O96017 543 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 GRIK1P39086 918 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FUT11Q495W5 492 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 TAS2R42Q7RTR8 314 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PYDC1Q8WXC3 89 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FAM136AQ96C01 138 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 APOL2Q9BQE5 337 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FOXP3Q9BZS1 431 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PPCSQ9HAB8 311 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 BFARQ9NZS9 450 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 RUVBL2Q9Y230 463 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 DTNAQ9Y4J8 743 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CYP3A7-CYP3A51PA0A087WV96 503 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 FAM237BA0A1B0GVD1 139 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 PSMD10O75832 226 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ZMPSTE24O75844 475 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CYP3A7P24462 503 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 MMRN1Q13201 1228 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF384Q8TF68 577 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CKAP2Q8WWK9 683 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 GLIS2Q9BZE0 524 aaPredicted RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SPC25Q9HBM1 224 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ZNRF3Q9ULT6 936 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CRYBG1Q9Y4K1 1723 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 POLBP06746 335 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 HMBSP08397 361 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 ACADSP16219 412 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CYP2F1P24903 491 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 NCALDP61601 193 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 DCAF12L1Q5VU92 463 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 APOBEC3FQ8IUX4 373 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CCT7Q99832 543 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 UBP1Q9NZI7 540 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 SLC12A6Q9UHW9 1150 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 CPSF3Q9UKF6 684 aaKnown RBP6.79□□□□□ -1.32
SMC1A-202ENST00000375340 GOLGA8CPA6NN73 597 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 LIASO43766 372 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 E2F6O75461 281 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 LAMTOR4Q0VGL1 99 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 EXOC3L1Q86VI1 746 aa6.79□□□□□ -1.32
SMC1A-202ENST00000375340 LRRC57Q8N9N7 239 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms