RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 APOA4P06727 396 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 FAM228BP0C875 321 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 PIK3R1P27986 724 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 SEL1L3Q68CR1 1132 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 ZNF57Q68EA5 555 aaPredicted RBP20.48■□□□□ 0.87
COL15A1-201ENST00000375001 CHSY1Q86X52 802 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 CENPTQ96BT3 561 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 TJP2Q9UDY2 1190 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 MYRFQ9Y2G1 1151 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 E9PCH4 1651 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 AKT1P31749 480 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 CYP51A1Q16850 503 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 BRINP3Q76B58 766 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 STK32AQ8WU08 396 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 SLC10A4Q96EP9 437 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 BTBD10Q9BSF8 475 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 GRIP2Q9C0E4 1043 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 THAP2Q9H0W7 228 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 ADAM30Q9UKF2 790 aa20.48■□□□□ 0.87
COL15A1-201ENST00000375001 SNTNA6NMZ2 147 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 CLOCKO15516 846 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 HERVK_113P62684 666 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 CNGA2Q16280 664 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 ZNF618Q5T7W0 954 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 TMPRSS6Q8IU80 811 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 FUKQ8N0W3 1084 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 WDR48Q8TAF3 677 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 ZSWIM1Q9BR11 485 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 SPASTQ9UBP0 616 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 RAG1P15918 1043 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 RAD23AP54725 363 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 PDIA6Q15084 440 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 GALNTL6Q49A17 601 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 OTUD3Q5T2D3 398 aaPredicted RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 TYW3Q6IPR3 259 aaKnown RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 ATG16L2Q8NAA4 619 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 NR5A2O00482 541 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 MLNP12872 115 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 SNRNP48Q6IEG0 339 aaKnown RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 PIF1Q9H611 641 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 TRPC7Q9HCX4 862 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 RPS7P62081 194 aaKnown RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 HPCAP84074 193 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 PTRHD1Q6GMV3 140 aaKnown RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 ZNF682O95780 498 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 CHRM3P20309 590 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 ALDH5A1P51649 535 aaPredicted RBP20.47■□□□□ 0.87
COL15A1-201ENST00000375001 OLFM1Q99784 485 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 KCTD10Q9H3F6 313 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 MBD2Q9UBB5 411 aa20.47■□□□□ 0.87
COL15A1-201ENST00000375001 FAM20BO75063 409 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 PDK1Q15118 436 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 PAPD7Q5XG87 772 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 TRIM62Q9BVG3 475 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 CENPXA8MT69 81 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 YWHABP31946 246 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 GLRBP48167 497 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 NSUN6Q8TEA1 469 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 RRM2P31350 389 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 RGS4P49798 205 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 NCALDP61601 193 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 PTK6Q13882 451 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 B3GNT6Q6ZMB0 384 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 TTC30AQ86WT1 665 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 TNIP3Q96KP6 325 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 FOPNLQ96NB1 174 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 PAFAH2Q99487 392 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 EIF3LQ9Y262 564 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 MEI4A8MW99 385 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 DDHD2O94830 711 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 FASP25445 335 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 SNRNP35Q16560 246 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 DGUOKQ16854 277 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 USP39Q53GS9 565 aaKnown RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 SPANXN2Q5MJ10 180 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 SYN2Q92777 582 aaPredicted RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 SEPHS2Q99611 448 aa20.46■□□□□ 0.87
COL15A1-201ENST00000375001 FARP1Q9Y4F1 1045 aaPredicted RBP20.46■□□□□ 0.87
COL15A1-201ENST00000375001 NCOA4Q13772 614 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 RAB42Q8N4Z0 105 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 FBXO40Q9UH90 709 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 RUVBL2Q9Y230 463 aaKnown RBP20.45■□□□□ 0.86
COL15A1-201ENST00000375001 PCDHB2Q9Y5E7 798 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 MROH7Q68CQ1 1323 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 FCGR1AP12314 374 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 AGAP1Q9UPQ3 857 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 ASMTLO95671 621 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 GLI1P08151 1106 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 ZSWIM7Q19AV6 140 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 UTS2BQ765I0 119 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 KRT78Q8N1N4 520 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 SH3TC2Q8TF17 1288 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 FAM210AQ96ND0 272 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 ZNF184Q99676 751 aaPredicted RBP20.45■□□□□ 0.86
COL15A1-201ENST00000375001 TUBGCP4Q9UGJ1 667 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 RPS6KL1Q9Y6S9 549 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 SALL3Q9BXA9 1300 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 SOAT2O75908 522 aa20.45■□□□□ 0.86
COL15A1-201ENST00000375001 ELF3P78545 371 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms