RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR5M3Q8NGP4 307 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 GRAPLQ8TC17 118 aaPredicted RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 NUP133Q8WUM0 1156 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 ANKS1AQ92625 1134 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 PGBD4Q96DM1 585 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 ANO3Q9BYT9 981 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 XPO4Q9C0E2 1151 aaKnown RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 HSD3B7Q9H2F3 369 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 PDCL3Q9H2J4 239 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 IFT22Q9H7X7 185 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 AATFQ9NY61 560 aaKnown RBP eCLIP5.36□□□□□ -1.55
USP48-202ENST00000374730 SRP68Q9UHB9 627 aaKnown RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 KCNJ14Q9UNX9 436 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 APOBEC2Q9Y235 224 aaKnown RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 NOC2LQ9Y3T9 749 aaKnown RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 SRPRBQ9Y5M8 271 aaKnown RBP5.36□□□□□ -1.55
USP48-202ENST00000374730 CDY2AQ9Y6F7 541 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 NRXN2Q9P2S2 1712 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 ANKRD31Q8N7Z5 1873 aa5.36□□□□□ -1.55
USP48-202ENST00000374730 BRWD3Q6RI45 1802 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 C10orf71Q711Q0 1435 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CYP2D7A0A087X1C5 515 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 TRIM75PA6NK02 468 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CTIFO43310 598 aaKnown RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 SMC2O95347 1197 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 PLEKHA8P1O95397 391 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CFBP00751 764 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 PRDX5P30044 214 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 KIF5BP33176 963 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 GSTO1P78417 241 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 PNOCQ13519 176 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 TRIM25Q14258 630 aaKnown RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 POSTNQ15063 836 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 NPY5RQ15761 445 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 LONRF3Q496Y0 759 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 RHOUQ7L0Q8 258 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 PTF1AQ7RTS3 328 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 DZIP1Q86YF9 867 aaKnown RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 THNSL2Q86YJ6 484 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 ZNF276Q8N554 614 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 MLKLQ8NB16 471 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CTCFLQ8NI51 663 aaPredicted RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 SPATA20Q8TB22 786 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 HAS1Q92839 578 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CCDC34Q96HJ3 373 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 EPC1Q9H2F5 836 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 IKZF4Q9H2S9 585 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 NRDE2Q9H7Z3 1164 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 DDX56Q9NY93 547 aaKnown RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 IFNKQ9P0W0 207 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 VPS54Q9P1Q0 977 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 MAN1B1Q9UKM7 699 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 CLCA2Q9UQC9 943 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 PAXBP1Q9Y5B6 917 aa5.35□□□□□ -1.55
USP48-202ENST00000374730 GREB1LQ9C091 1923 aaPredicted RBP5.35□□□□□ -1.55
USP48-202ENST00000374730 SNED1Q8TER0 1413 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 A0A087X1B8 175 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 LOC102724159A0A0B4J2E5 919 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.34□□□□□ -1.55
USP48-202ENST00000374730 SMIM22K7EJ46 135 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 POLR2DO15514 142 aaKnown RBP5.34□□□□□ -1.55
USP48-202ENST00000374730 CCP110O43303 1012 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 FAM20BO75063 409 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 TMEM127O75204 238 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 BAG3O95817 575 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 TUBB4AP04350 444 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 LDHCP07864 332 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 CLEC2LP0C7M8 214 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 SKILP12757 684 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 SCG2P13521 617 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 TNNT1P13805 278 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 ZNF18P17022 549 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 HK1P19367 917 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 SFPQP23246 707 aaKnown RBP eCLIP5.34□□□□□ -1.55
USP48-202ENST00000374730 CALML3P27482 149 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 RFC4P35249 363 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 GNAQP50148 359 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 GYS2P54840 703 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 SESN3P58005 492 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 MORC3Q14149 939 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 GRM4Q14833 912 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 PWP2Q15269 919 aaKnown RBP5.34□□□□□ -1.55
USP48-202ENST00000374730 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
USP48-202ENST00000374730 TPD52L1Q16890 204 aaPredicted RBP5.34□□□□□ -1.55
USP48-202ENST00000374730 CRY2Q49AN0 593 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 PITRM1Q5JRX3 1037 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 C12orf60Q5U649 245 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 IQSEC1Q6DN90 963 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 CCDC62Q6P9F0 684 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 ZNF627Q7L945 461 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 ZNF804AQ7Z570 1209 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 MRGPRGQ86SM5 289 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 MRGPREQ86SM8 312 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 DGKHQ86XP1 1220 aa5.34□□□□□ -1.55
USP48-202ENST00000374730 FOXP4Q8IVH2 680 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms