RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SERPINB12Q96P63 405 aa11.49□□□□□ -0.57
PHACTR4-202ENST00000373839 DCLK3Q9C098 648 aa11.49□□□□□ -0.57
PHACTR4-202ENST00000373839 MTMR12Q9C0I1 747 aa11.49□□□□□ -0.57
PHACTR4-202ENST00000373839 KANSL1LA0AUZ9 987 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 GOLGA8RI6L899 631 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 RTN3O95197 1032 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ENO3P13929 434 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 NEK2P51955 445 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 DENND1BQ6P3S1 775 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ACOT1Q86TX2 421 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 NUP93Q8N1F7 819 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 B4GALNT2Q8NHY0 566 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 AGO4Q9HCK5 861 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 A0A087WZ62 844 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SLCO1B7G3V0H7 640 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PDHXO00330 501 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 AKAP10O43572 662 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ENO1P06733 434 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PTPN7P35236 360 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PPIL2Q13356 520 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CNGA3Q16281 694 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SMIM5Q71RC9 77 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 TMEM176AQ96HP8 235 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 C17orf80Q9BSJ5 609 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PI4K2AQ9BTU6 479 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ILKAPQ9H0C8 392 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ZDHHC9Q9Y397 364 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PTPRMP28827 1452 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CARSP49589 748 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PRIM2P49643 509 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 KDSRQ06136 332 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CSTF3Q12996 717 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 TMED1Q13445 227 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SMAD1Q15797 465 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CARNMT1Q8N4J0 409 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 EPN3Q9H201 632 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 RPS6KL1Q9Y6S9 549 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 MAGEB16A2A368 324 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 FDPSP14324 419 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 DNAJB2P25686 324 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 GUCA1AP43080 201 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 RAD23BP54727 409 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 DAB2P98082 770 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CREMQ03060 361 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PTPN11Q06124 597 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 LRRC23Q53EV4 343 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SLC27A1Q6PCB7 646 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ZPBP2Q6X784 338 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CEP70Q8NHQ1 597 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 RFWD2Q8NHY2 731 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 MRPL48Q96GC5 212 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 RIOX1Q9H6W3 641 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CPA4Q9UI42 421 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SOX13Q9UN79 622 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 UMODL1Q5DID0 1318 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 CKBP12277 381 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 EPB42P16452 691 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 PTPN3P26045 913 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SKP1P63208 163 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 WLSQ5T9L3 541 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 SYT15Q9BQS2 421 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
PHACTR4-202ENST00000373839 A0A1B0GW55 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 IFRD1O00458 451 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 SLC37A4O43826 429 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L2P0CJ85 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L3P0CJ86 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L4P0CJ87 422 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L5P0CJ88 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L6P0CJ89 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4L7P0CJ90 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 CHN1P15882 459 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 HOXB8P17481 243 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 CCR1P32246 355 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 CYP24A1Q07973 514 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 MTF1Q14872 753 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 GRIK4Q16099 956 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 SMTNL2Q2TAL5 461 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 OVOS1Q6IE37 1185 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 PLEKHM3Q6ZWE6 761 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 C4orf33Q8N1A6 199 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 WDR24Q96S15 920 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 DUX4Q9UBX2 424 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 BLVRAP53004 296 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 VSNL1P62760 191 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 LONRF1Q17RB8 773 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 IQSEC1Q6DN90 963 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 P3H2Q8IVL5 708 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 SERPINB11Q96P15 392 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 PRRG3Q9BZD7 231 aa11.47□□□□□ -0.57
PHACTR4-202ENST00000373839 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms