RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
TRAPPC3-201ENST00000373159 CPQQ9Y646 472 aa13.95□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZFYVE26Q68DK2 2539 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 KAT7O95251 611 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 HNRNPLP14866 589 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 HOXD13P35453 343 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 P2RY2P41231 377 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 GRIA2P42262 883 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 TNFRSF4P43489 277 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 KIR2DL1P43626 348 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 CEBPZQ03701 1054 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 TAF10Q12962 218 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 MDH1BQ5I0G3 518 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 SPDYCQ5MJ68 293 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 GLIS3Q8NEA6 775 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 PIGKQ92643 395 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 TBC1D14Q9P2M4 693 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 EVLQ9UI08 416 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 NME7Q9Y5B8 376 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 ANAPC1Q9H1A4 1944 aa13.94□□□□□ -0.18
TRAPPC3-201ENST00000373159 CACNA1EQ15878 2313 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 SGK1O00141 431 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 KLF8O95600 359 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ADH1CP00326 375 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ABL1P00519 1130 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 APODP05090 189 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 SYT1P21579 422 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZNF252P-AS1Q0IIN9 211 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 MESP2Q0VG99 397 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 LMAN2Q12907 356 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 EOGTQ5NDL2 527 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 UNQ6494/PRO21346Q6UXR6 183 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 LPCAT2Q7L5N7 544 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 HS2ST1Q7LGA3 356 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ALLCQ8N6M5 410 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 KDF1Q8NAX2 398 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 TXNDC5Q8NBS9 432 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZNF507Q8TCN5 953 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 WHAMMQ8TF30 809 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 SLITRK1Q96PX8 696 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 TNMDQ9H2S6 317 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 KBTBD4Q9NVX7 518 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 CFAP97Q9P2B7 532 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 PCNX2A6NKB5 2137 aa13.93□□□□□ -0.18
TRAPPC3-201ENST00000373159 ASCC3Q8N3C0 2202 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 C1QTNF9BB2RNN3 333 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 EIF3DO15371 548 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 MAP3K13O43283 966 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 STAU1O95793 577 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 C1QTNF9P0C862 333 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 TNNI1P19237 187 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 YWHAQP27348 245 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 TIE1P35590 1138 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 DPP6P42658 865 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 FOXC1Q12948 553 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 PSMD6Q15008 389 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 SNRNP35Q16560 246 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 WDR72Q3MJ13 1102 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 EMC10Q5UCC4 262 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 EPM2AIP1Q7L775 607 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 SYT12Q8IV01 421 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 SFTPA1Q8IWL2 248 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 PDILTQ8N807 584 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 OVCA2Q8WZ82 227 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 HPS3Q969F9 1004 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 ARHGEF4Q9NR80 690 aa13.92□□□□□ -0.18
TRAPPC3-201ENST00000373159 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 A8MXQ7 604 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 ADAM23O75077 832 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms