RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PABPC5Q96DU9 382 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ASPSCR1Q9BZE9 553 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GAKO14976 1311 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ATP9BO43861 1147 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 SEMA3DO95025 777 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GARTP22102 1010 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GALCP54803 685 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 IMPG1Q17R60 797 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GYPCP04921 128 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GRIN1Q05586 938 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 P3H1Q32P28 736 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 RIBC1Q8N443 379 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 VGLL2Q8N8G2 317 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ATP6V0D2Q8N8Y2 350 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.24e-6■■■■■ 29.3
RAPGEF1-201ENST00000372189 MTMR12Q9C0I1 747 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMEM165Q9HC07 324 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 KANSL3Q9P2N6 904 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 PSEN2P49810 448 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 POTEAQ6S8J7 498 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 NIPA1Q7RTP0 329 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 NOA1Q8NC60 698 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 DACH2Q96NX9 599 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC7A5P2Q9GIP4 190 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GIT2Q14161 759 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 ADGRF2Q8IZF7 708 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 VMP1Q96GC9 406 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 METTL5Q9NRN9 209 aaKnown RBP13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 AP1G2O75843 785 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 AMHP03971 560 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 ARHGEF7Q14155 803 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 C16orf89Q6UX73 402 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 RIOX2Q8IUF8 465 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 REPS2Q8NFH8 660 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 ALDH2P05091 517 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 MTHFD1LQ6UB35 978 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 JAMLQ86YT9 394 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 CMTM5Q96DZ9 223 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 TEX12Q9BXU0 123 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 NOD2Q9HC29 1040 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 TSR3Q9UJK0 312 aaKnown RBP13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 IGF2BP3O00425 579 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 KLHL2O95198 593 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 FKBP1BP68106 108 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 MDH1BQ5I0G3 518 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 KLHDC7AQ5VTJ3 777 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC2A3P11169 496 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC11A2P49281 568 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 MRPS31Q92665 395 aaKnown RBP13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 PPP1R2P1Q96PQ5 205 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 SPOCK3Q9BQ16 436 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 KLHL25Q9H0H3 589 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 CCDC134Q9H6E4 229 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 DPP7Q9UHL4 492 aa13.81□□□□□ -0.2
RAPGEF1-201ENST00000372189 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 HADHAP40939 763 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 SEC24CP53992 1094 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRADDQ15628 312 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 SERPINB9P50453 376 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 SYTL3Q4VX76 610 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 IRF6O14896 467 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 SP3Q02447 781 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 FASTKD1Q53R41 847 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 CLMNQ96JQ2 1002 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 FKTNO75072 461 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 H2AFXP16104 143 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 MAP4P27816 1152 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 EPHB3P54753 998 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 DEFA1P59665 94 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 DEFA3P59666 94 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 NOGQ13253 232 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 THEMIS2Q5TEJ8 643 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 WDR93Q6P2C0 686 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 CYB5D1Q6P9G0 228 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 NEU2Q9Y3R4 380 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 LHX1P48742 406 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 MYBPC2Q14324 1141 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRIM69Q86WT6 500 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 KIF2BQ8N4N8 673 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 FUT8Q9BYC5 575 aa13.8□□□□□ -0.2
RAPGEF1-201ENST00000372189 PPP1R3GB7ZBB8 358 aa13.79□□□□□ -0.2
RAPGEF1-201ENST00000372189 TBC1D12O60347 775 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms