RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 PLEKHA5Q9HAU0 1116 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SENP1Q9P0U3 644 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SLC45A1Q9Y2W3 748 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 CCL15-CCL14A0A0B4J2E2 113 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 GCLCP48506 637 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 TFDP2Q14188 446 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 ZKSCAN8Q15776 578 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 CCL15Q16663 113 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 PPP1R26Q5T8A7 1209 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 APBB1IPQ7Z5R6 666 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 ATP11CQ8NB49 1132 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 MS4A4AQ96JQ5 239 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 MRPL45Q9BRJ2 306 aaKnown RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 CXCL16Q9H2A7 254 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SETD4Q9NVD3 440 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SNTG2Q9NY99 539 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 PSMC3IPQ9P2W1 217 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SNX9Q9Y5X1 595 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 CLUHO75153 1309 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SMAPO00193 183 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 RASSF9O75901 435 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 HOXD8P13378 290 aaPredicted RBP30.25■■■□□ 2.43
SSBP3-204ENST00000371320 ROR1Q01973 937 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 RASA2Q15283 850 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 FAM47CQ5HY64 1035 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 DARS2Q6PI48 645 aaKnown RBP30.25■■■□□ 2.43
SSBP3-204ENST00000371320 NPNTQ6UXI9 565 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 ACOT1Q86TX2 421 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 SMC6Q96SB8 1091 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 PAIP2Q9BPZ3 127 aaKnown RBP30.25■■■□□ 2.43
SSBP3-204ENST00000371320 MORF4L1Q9UBU8 362 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 XPO7Q9UIA9 1087 aaKnown RBP30.25■■■□□ 2.43
SSBP3-204ENST00000371320 DERAQ9Y315 318 aa30.25■■■□□ 2.43
SSBP3-204ENST00000371320 PRPF4O43172 522 aaKnown RBP eCLIP30.24■■■□□ 2.433e-6■■■□□ 17
SSBP3-204ENST00000371320 GEMIN4P57678 1058 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 TMEM62Q0P6H9 643 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 DPYSL3Q14195 570 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 SPATA21Q7Z572 469 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 TCRBV7S3A2A0A539 114 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 GSTA1P08263 222 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 HOXA11P31270 313 aaPredicted RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 STIP1P31948 543 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 WDR4P57081 412 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 BASP1P80723 227 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 KRT81Q14533 505 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 NOMO1Q15155 1222 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 CCDC14Q49A88 953 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 EFHC2Q5JST6 749 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 PMF1Q6P1K2 205 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 GPR142Q7Z601 462 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 PDIK1LQ8N165 341 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 MAML3Q96JK9 1138 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 ZMAT2Q96NC0 199 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 FAM49AQ9H0Q0 323 aaPredicted RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 ADAMTS10Q9H324 1103 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 ABCF3Q9NUQ8 709 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 RABGEF1Q9UJ41 708 aa30.24■■■□□ 2.43
SSBP3-204ENST00000371320 ZMYND8Q9ULU4 1186 aaPredicted RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 SMG5Q9UPR3 1016 aaKnown RBP30.24■■■□□ 2.43
SSBP3-204ENST00000371320 E7ESA3 106 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 DNAJC8O75937 253 aaPredicted RBP30.23■■■□□ 2.43
SSBP3-204ENST00000371320 SSTR1P30872 391 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 GTF2A2P52657 109 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 ATP11AP98196 1134 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 C3orf62Q6ZUJ4 267 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 CATSPER4Q7RTX7 472 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 ZC3H18Q86VM9 953 aaKnown RBP30.23■■■□□ 2.43
SSBP3-204ENST00000371320 MAP7D3Q8IWC1 876 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.23■■■□□ 2.43
SSBP3-204ENST00000371320 GCOM2Q9BZD3 368 aaPredicted RBP30.23■■■□□ 2.43
SSBP3-204ENST00000371320 KIF9Q9HAQ2 790 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 SLC12A4Q9UP95 1085 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 PPEF2O14830 753 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 TMEM63AO94886 807 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 TAC1P20366 129 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 ACVR2BQ13705 512 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 SCYL2Q6P3W7 929 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 SLC27A1Q6PCB7 646 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 OLFML1Q6UWY5 402 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 TTC30AQ86WT1 665 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 FBXO36Q8NEA4 188 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 SNX27Q96L92 541 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 ABHD16BQ9H3Z7 469 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 FAM49BQ9NUQ9 324 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 HAUS2Q9NVX0 235 aa30.23■■■□□ 2.43
SSBP3-204ENST00000371320 CITO14578 2027 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 RRN3P2A6NIE6 340 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 FOXN2P32314 431 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 SLC18A1P54219 525 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 YARSP54577 528 aaKnown RBP30.22■■■□□ 2.43
SSBP3-204ENST00000371320 BBS9Q3SYG4 887 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 PKDCCQ504Y2 493 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 C4orf33Q8N1A6 199 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 DENND1AQ8TEH3 1009 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 BRI3BPQ8WY22 251 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 RNF157Q96PX1 679 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 KLC4Q9NSK0 619 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 FETUBQ9UGM5 382 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 ARL2BPQ9Y2Y0 163 aa30.22■■■□□ 2.43
SSBP3-204ENST00000371320 ASMTLO95671 621 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms