RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 EPC2Q52LR7 807 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 C1orf220Q5T0J3 134 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 TDRD10Q5VZ19 366 aaKnown RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 PKN3Q6P5Z2 889 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 ZNF837Q96EG3 531 aaPredicted RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 FNBP1Q96RU3 617 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 ACO2Q99798 780 aaKnown RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 TRIM8Q9BZR9 551 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
TPM3-213ENST00000368545 HIPK3Q9H422 1215 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 FZD8Q9H461 694 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 TRIM39Q9HCM9 518 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
TPM3-213ENST00000368545 LRRIQ3A6PVS8 624 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 HAS3O00219 553 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TP53P04637 393 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 PGRP06401 933 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ITGAVP06756 1048 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SMIM10L2AP0DMW4 78 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SMIM10L2BP0DMW5 78 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 GCLMP48507 274 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 JAM2P57087 298 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ERVK-21P61565 698 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 MBTD1Q05BQ5 628 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 PPP3CAQ08209 521 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 PRPF4BQ13523 1007 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 SPA17Q15506 151 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ASIC2Q16515 512 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ARHGAP29Q52LW3 1261 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TDRD12Q587J7 1177 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 MARCH8Q5T0T0 291 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 C12orf40Q86WS4 652 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 PLEKHO2Q8TD55 490 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 NKD2Q969F2 451 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 FAM81BQ96LP2 452 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 STK33Q9BYT3 514 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 ARHGAP20Q9P2F6 1191 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SFMBT1Q9UHJ3 866 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 NCOR1O75376 2440 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SMIM35A0A1B0GVV1 85 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 ANKRD34BA5PLL1 514 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 H3BRJ5 948 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 OGTO15294 1046 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ZC3H11AO75152 810 aaKnown RBP eCLIP9.35□□□□□ -0.91
TPM3-213ENST00000368545 LCA5LO95447 670 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 GNAT1P11488 350 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 PROZP22891 400 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 KIF11P52732 1056 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 PCBP4P57723 403 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 GJA9P57773 515 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 NLRP11P59045 1033 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 SIGLEC14Q08ET2 396 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 STAT4Q14765 748 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SURF1Q15526 300 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ATF7IP2Q5U623 682 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 MPZL3Q6UWV2 235 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SRGAP1Q7Z6B7 1085 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 GPR161Q8N6U8 529 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 ACRBPQ8NEB7 543 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 FBXL13Q8NEE6 735 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 KIF18AQ8NI77 898 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 LMO3Q8TAP4 145 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SLC7A14Q8TBB6 771 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 LMBR1Q8WVP7 490 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 KAT2BQ92831 832 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 CCDC127Q96BQ5 260 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 LENG1Q96BZ8 264 aaPredicted RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 SLC6A18Q96N87 628 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 CORO1BQ9BR76 489 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 LMAN2LQ9H0V9 348 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 CDH19Q9H159 772 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 IFT122Q9HBG6 1241 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 LUC7LQ9NQ29 371 aaKnown RBP9.35□□□□□ -0.91
TPM3-213ENST00000368545 KRT82Q9NSB4 513 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 MYO1AQ9UBC5 1043 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 TNFSF13BQ9Y275 285 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 CNTNAP2Q9UHC6 1331 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 ANK1P16157 1881 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 SCN10AQ9Y5Y9 1956 aa9.35□□□□□ -0.91
TPM3-213ENST00000368545 F8VZ95 297 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 GPR39O43194 453 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 AKR1B10O60218 316 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 EDN1P05305 212 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 CA3P07451 260 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 CTSBP07858 339 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 MYL3P08590 195 aa9.34□□□□□ -0.91
TPM3-213ENST00000368545 DLATP10515 647 aaKnown RBP9.34□□□□□ -0.91
TPM3-213ENST00000368545 FERP16591 822 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms