RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TSPAN16Q9UKR8 245 aa19.75■□□□□ 0.75
LMNA-204ENST00000368298 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.75■□□□□ 0.75
LMNA-204ENST00000368298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.75■□□□□ 0.75
LMNA-204ENST00000368298 TTC28Q96AY4 2481 aa19.75■□□□□ 0.75
LMNA-204ENST00000368298 OBSL1O75147 1896 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 A0A1W2PRU2 124 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 EPHB6O15197 1021 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 TPM3P06753 285 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 CEBPBP17676 345 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 GBP2P32456 591 aaPredicted RBP19.74■□□□□ 0.75
LMNA-204ENST00000368298 PPP3CCP48454 512 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 SLC5A3P53794 718 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 BCAT1P54687 386 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 HESX1Q9UBX0 185 aa19.74■□□□□ 0.75
LMNA-204ENST00000368298 MAGED2Q9UNF1 606 aaPredicted RBP19.74■□□□□ 0.75
LMNA-204ENST00000368298 BRD2P25440 801 aaKnown RBP19.73■□□□□ 0.75
LMNA-204ENST00000368298 WEE1P30291 646 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 CLCN1P35523 988 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 JAM2P57087 298 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 SLC8A3P57103 927 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 POLR2FP61218 127 aaKnown RBP19.73■□□□□ 0.75
LMNA-204ENST00000368298 BST2Q10589 180 aaKnown RBP19.73■□□□□ 0.75
LMNA-204ENST00000368298 RAPGEF1Q13905 1077 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 GOLGA7BQ2TAP0 167 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 NEK11Q8NG66 645 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 ZNF606Q8WXB4 792 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 ING5Q8WYH8 240 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 OVCA2Q8WZ82 227 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 NXPE3Q969Y0 559 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 ATXN3LQ9H3M9 355 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 NCANO14594 1321 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 MUC3AQ02505 3323 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 ANHXE9PGG2 379 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 F8VZ95 297 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 XPO1O14980 1071 aaKnown RBP19.73■□□□□ 0.75
LMNA-204ENST00000368298 CYP26A1O43174 497 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 MED7O43513 233 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 TADA3O75528 432 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 GJA1P17302 382 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 SP100P23497 879 aaPredicted RBP19.73■□□□□ 0.75
LMNA-204ENST00000368298 YWHAQP27348 245 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 UBASH3AP57075 661 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 BPIFB4P59827 614 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 PTK2Q05397 1052 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 TEAD2Q15562 447 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 RAB41Q5JT25 222 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 SCAMP5Q8TAC9 235 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 SLC35F5Q8WV83 523 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 GCNAQ96QF7 691 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 FBXO44Q9H4M3 255 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 LIMD1Q9UGP4 676 aa19.73■□□□□ 0.75
LMNA-204ENST00000368298 NCOR1O75376 2440 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 ANAPC1Q9H1A4 1944 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 DDX6P26196 483 aaKnown RBP eCLIP19.72■□□□□ 0.75
LMNA-204ENST00000368298 GNA15P30679 374 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 PBX1P40424 430 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 USP8P40818 1118 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 PLA2G4AP47712 749 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 KIF11P52732 1056 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 PDE4CQ08493 712 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 ARHGAP15Q53QZ3 475 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 PIGZQ86VD9 579 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 PDZD8Q8NEN9 1154 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 KCTD13Q8WZ19 329 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 MCRS1Q96EZ8 462 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 ZSWIM3Q96MP5 696 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 TASP1Q9H6P5 420 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 TRPV4Q9HBA0 871 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 IGSF9Q9P2J2 1179 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 USP3Q9Y6I4 520 aa19.72■□□□□ 0.75
LMNA-204ENST00000368298 CALCAP01258 141 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 ZDHHC11BP0C7U3 371 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 PFKLP17858 780 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 SSTR3P32745 418 aaPredicted RBP19.71■□□□□ 0.75
LMNA-204ENST00000368298 TAF10Q12962 218 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 GPRIN1Q7Z2K8 1008 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 RNF135Q8IUD6 432 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 MRPS31Q92665 395 aaKnown RBP19.71■□□□□ 0.75
LMNA-204ENST00000368298 PCMTD1Q96MG8 357 aaPredicted RBP19.71■□□□□ 0.75
LMNA-204ENST00000368298 ASB16Q96NS5 453 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 SLITRK1Q96PX8 696 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 ACP6Q9NPH0 428 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 IFNKQ9P0W0 207 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 PCDHGC3Q9UN70 934 aa19.71■□□□□ 0.75
LMNA-204ENST00000368298 ZNF840PA6NDX5 716 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 TNFRSF10AO00220 468 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 THAP12O43422 761 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 PNMA6AP0CW24 399 aaPredicted RBP19.7■□□□□ 0.74
LMNA-204ENST00000368298 GPD2P43304 727 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 HTR4Q13639 388 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 STXBP5Q5T5C0 1151 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 GPR158Q5T848 1215 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 MTSS1LQ765P7 747 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 SLC47A2Q86VL8 602 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 MON1AQ86VX9 555 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 UBA3Q8TBC4 463 aa19.7■□□□□ 0.74
LMNA-204ENST00000368298 ZNF830Q96NB3 372 aaPredicted RBP19.7■□□□□ 0.74
LMNA-204ENST00000368298 SLC46A2Q9BY10 475 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms