RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 AP4E1Q9UPM8 1137 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CAPN6Q9Y6Q1 641 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 PTGISQ16647 500 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 ZBTB45Q96K62 511 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 NUDT5Q9UKK9 219 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 RNF112Q9ULX5 631 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 A8MX80 341 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 PPP1R37O75864 691 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CALCAP01258 141 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CDH8P55286 799 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 PTK6Q13882 451 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 GRIK5Q16478 980 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CLEC4FQ8N1N0 589 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 RUVBL2Q9Y230 463 aaKnown RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 C2orf81A6NN90 581 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 TISP43B9A030 160 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 TRIM16O95361 564 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 SEC24CP53992 1094 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 BCAT1P54687 386 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 C11orf63Q6NUN7 778 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ANO5Q75V66 913 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 SLC44A2Q8IWA5 706 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 OTUB1Q96FW1 271 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 OSGEPL1Q9H4B0 414 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ALDH2P05091 517 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RHOCP08134 193 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 GEMIN4P57678 1058 aaKnown RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 WASHC5Q12768 1159 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 BTN2A2Q8WVV5 523 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 COPS5Q92905 334 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 MANSC1Q9H8J5 431 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RAD18Q9NS91 495 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 CACNA2D2Q9NY47 1150 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 FRMPD1Q5SYB0 1578 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 CAND2O75155 1236 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 MOB2Q70IA6 237 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 PATL1Q86TB9 770 aaKnown RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 NT5DC3Q86UY8 548 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RXFP2Q8WXD0 754 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 EPN3Q9H201 632 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 CLASP2O75122 1294 aaKnown RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 GJB6O95452 261 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 EPHB3P54753 998 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RHOAP61586 193 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 VGLL4Q14135 290 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 FBXO47Q5MNV8 452 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RARS2Q5T160 578 aaKnown RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ANXA9O76027 345 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 SUPT7LO94864 414 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 NDST1P52848 882 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ADIGQ0VDE8 80 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 BOLA3Q53S33 107 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 ZNF571Q7Z3V5 609 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 WDR49Q8IV35 697 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 RIOX1Q9H6W3 641 aa13.36□□□□□ -0.27
PTPRK-207ENST00000368226 FAM32AQ9Y421 112 aaKnown RBP13.36□□□□□ -0.27
PTPRK-207ENST00000368226 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 CCDC130P13994 396 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 RAG1P15918 1043 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 MAGEA9P43362 315 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 SCNN1BP51168 640 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 DNAJC3Q13217 504 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 TCEA2Q15560 299 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 RD3Q7Z3Z2 195 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 XPO6Q96QU8 1125 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 CCT8L2Q96SF2 557 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 PKD2L2Q9NZM6 624 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 CDV3Q9UKY7 258 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 JCHAINP01591 159 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 KLRC2P26717 231 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 RAP1GDS1P52306 607 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 INPP5AQ14642 412 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 PTAR1Q7Z6K3 402 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 C4orf19Q8IY42 314 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 GRAMD1AQ96CP6 724 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 PSTPIP1O43586 416 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 TPH1P17752 444 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 GEMP55040 296 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 TRADDQ15628 312 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 ZNF280DQ6N043 979 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 INPP5DQ92835 1189 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-207ENST00000368226 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 F8VZ95 297 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 SLC2A3P11169 496 aa13.35□□□□□ -0.27
PTPRK-207ENST00000368226 OCA2Q04671 838 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms