RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 GJD3Q8N144 294 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ZCCHC9Q8N567 271 aaKnown RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 HELQQ8TDG4 1101 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 SEPT1Q8WYJ6 367 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 KCNN1Q92952 543 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 FBXL18Q96ME1 805 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ZNF570Q96NI8 536 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 LXNQ9BS40 222 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 SAR1AQ9NR31 198 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 EVPLQ92817 2033 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 A6NHS1 94 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ENPP3O14638 875 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 DIAPH2O60879 1101 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ACSL3O95573 720 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 RB1P06400 928 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 TSHRP16473 764 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 GNAZP19086 355 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 CALB2P22676 271 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 PTPN7P35236 360 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 CHKAP35790 457 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 KCNJ1P48048 391 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 SP4Q02446 784 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 LPIN1Q14693 890 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 PDK4Q16654 411 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 PUS10Q3MIT2 529 aaKnown RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 TCEAL5Q5H9L2 206 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 KATNAL2Q8IYT4 538 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 DENND1AQ8TEH3 1009 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 CDHR1Q96JP9 859 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 NSUN3Q9H649 340 aaKnown RBP12.09□□□□□ -0.47
USF1-201ENST00000368019 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 LNPEPQ9UIQ6 1025 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 ARID2Q68CP9 1835 aa12.09□□□□□ -0.47
USF1-201ENST00000368019 WDR81Q562E7 1941 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 H3BQ06 376 aaPredicted RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 SMAPO00193 183 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 C2CD2LO14523 706 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 CLDN3O15551 220 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 CYP26A1O43174 497 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 PROSCO94903 275 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 RPSAP08865 295 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 DLATP10515 647 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 ACADSP16219 412 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 KLRC2P26717 231 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 ADSSP30520 456 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 BMPR1AP36894 532 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 LTBRP36941 435 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 GCLMP48507 274 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 DLG4P78352 724 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 MRPS35P82673 323 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 MGAT5Q09328 741 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 MPP2Q14168 576 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 LBRQ14739 615 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 LRRC14Q15048 493 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 GRIK4Q16099 956 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 KYNUQ16719 465 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 CTC1Q2NKJ3 1217 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 SGSM1Q2NKQ1 1148 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 SLC45A4Q5BKX6 768 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 MIS18BP1Q6P0N0 1132 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 HAUS6Q7Z4H7 955 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 RHOT1Q8IXI2 618 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 LMNTD2Q8IXW0 634 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
USF1-201ENST00000368019 MCOLN2Q8IZK6 566 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 FIBCD1Q8N539 461 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 ANKRD42Q8N9B4 389 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 CYP2W1Q8TAV3 490 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 NAF1Q96HR8 494 aaKnown RBP12.08□□□□□ -0.48
USF1-201ENST00000368019 RMDN2Q96LZ7 410 aa12.08□□□□□ -0.48
USF1-201ENST00000368019 MFSD14AQ96MC6 490 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms