RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 RHOBTB1O94844 696 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 DDX5P17844 614 aaKnown RBP17.14■□□□□ 0.33
SCAF8-201ENST00000367178 EFEMP1Q12805 493 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 ELAVL2Q12926 359 aaKnown RBP17.14■□□□□ 0.33
SCAF8-201ENST00000367178 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 ARHGEF19Q8IW93 802 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 MCOLN2Q8IZK6 566 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 SOCS4Q8WXH5 440 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 RUBCNLQ9H714 662 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 CRLS1Q9UJA2 301 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 TSPAN16Q9UKR8 245 aa17.14■□□□□ 0.33
SCAF8-201ENST00000367178 POMCP01189 267 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 MBL2P11226 248 aaPredicted RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 ADCYAP1R1P41586 468 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 CATSPERGQ6ZRH7 1159 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 CCNJLQ8IV13 435 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 ERP27Q96DN0 273 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 AAR2Q9Y312 384 aaKnown RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 PCDHAC2Q9Y5I4 1007 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 TIMM13Q9Y5L4 95 aaPredicted RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 GHRP10912 638 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 RAB27AP51159 221 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 C11orf63Q6NUN7 778 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 MTMR8Q96EF0 704 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 COG4Q9H9E3 785 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 OVOS1Q6IE37 1185 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 TBC1D19Q8N5T2 526 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 FBXO25Q8TCJ0 367 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 TMEM121Q9BTD3 319 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 SLC12A8A0AV02 714 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 IL10P22301 178 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
SCAF8-201ENST00000367178 ICE2Q659A1 982 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 RIOX2Q8IUF8 465 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 FBXO36Q8NEA4 188 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 XPNPEP3Q9NQH7 507 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 WHRNQ9P202 907 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 VPS9D1Q9Y2B5 631 aa17.13■□□□□ 0.33
SCAF8-201ENST00000367178 ASS1P00966 412 aaKnown RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ALDH2P05091 517 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SEC24CP53992 1094 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 POLE2P56282 527 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SH3RF1Q7Z6J0 888 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ZNF410Q86VK4 478 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 CCDC60Q8IWA6 550 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ARMC2Q8NEN0 867 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ACTL9Q8TC94 416 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 NAT9Q9BTE0 207 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 DMGDHQ9UI17 866 aaKnown RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SYNDIG1LA6NDD5 238 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 MEIS2O14770 477 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 RARGP13631 454 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ENO3P13929 434 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 RAD23BP54727 409 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 ACTN3Q08043 901 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 POLD3Q15054 466 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 CCNG2Q16589 344 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 TIGD7Q6NT04 549 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 CDY1Q9Y6F8 540 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SDR42E2A6NKP2 422 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SERPIND1P05546 499 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 IRAK1P51617 712 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 PPIL2Q13356 520 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 IQSEC1Q6DN90 963 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 MRNIPQ6NTE8 343 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 C1orf186Q6ZWK4 172 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SEC16BQ96JE7 1060 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 CYP39A1Q9NYL5 469 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 PSEN2P49810 448 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 FAM83EQ2M2I3 478 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 PARP9Q8IXQ6 854 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 MRPL1Q9BYD6 325 aaKnown RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
SCAF8-201ENST00000367178 WARS2Q9UGM6 360 aaKnown RBP17.12■□□□□ 0.33
SCAF8-201ENST00000367178 IRF6O14896 467 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 PSMD10O75832 226 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 ACAT1P24752 427 aaKnown RBP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 DNAL1Q4LDG9 190 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 HS6ST3Q8IZP7 471 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 APOL5Q9BWW9 433 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 KANSL3Q9P2N6 904 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 MTO1Q9Y2Z2 717 aaKnown RBP17.11■□□□□ 0.33
SCAF8-201ENST00000367178 SYCE1LA8MT33 242 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 JCHAINP01591 159 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 LGALS2P05162 132 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 HAS1Q92839 578 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 KIF17Q9P2E2 1029 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 C2orf81A6NN90 581 aa17.11■□□□□ 0.33
SCAF8-201ENST00000367178 EEF1DP29692 281 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms