RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 DLGAP2Q9P1A6 1054 aa15.41■□□□□ 0.06
PRKN-204ENST00000366896 WDR35Q9P2L0 1181 aa15.41■□□□□ 0.06
PRKN-204ENST00000366896 RTN3O95197 1032 aaPredicted RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 KRT1P04264 644 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 ITGAVP06756 1048 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 BRD2P25440 801 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 OASLQ15646 514 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 TAF1BQ53T94 588 aaPredicted RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 ZFYVE27Q5T4F4 411 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 EEPD1Q7L9B9 569 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 SOCS4Q8WXH5 440 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 HAUS1Q96CS2 278 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 DDX56Q9NY93 547 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 LRCH1Q9Y2L9 728 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 A0A0B4J269 797 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 C2CD2LO14523 706 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 RFC5P40937 340 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 CAP1Q01518 475 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 OGDHQ02218 1023 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 KHDC1Q4VXA5 237 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 TARS2Q9BW92 718 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 DHX33Q9H6R0 707 aaKnown RBP15.4■□□□□ 0.06
PRKN-204ENST00000366896 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 PCDH9Q9HC56 1237 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRKN-204ENST00000366896 ZFP69BQ9UJL9 534 aa15.4■□□□□ 0.06
PRKN-204ENST00000366896 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 LRRIQ4A6NIV6 560 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 GLRA2P23416 452 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 RGS2P41220 211 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 ARSEP51690 589 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 VCPP55072 806 aaKnown RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 PIGHQ14442 188 aaPredicted RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 CTC1Q2NKJ3 1217 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 PCGF5Q86SE9 256 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 FBXO16Q8IX29 292 aaPredicted RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 UCMAQ8WVF2 138 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 ZNF606Q8WXB4 792 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 MIPEPQ99797 713 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 MSTO1Q9BUK6 570 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 ADAM33Q9BZ11 813 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 SAGE1Q9NXZ1 904 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 ZNF148Q9UQR1 794 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 SIP14410 1827 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 F8VP50 259 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 ATG7O95352 703 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 CDH5P33151 784 aaPredicted RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 ARL2P36404 184 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 OCRLQ01968 901 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 GPS1Q13098 491 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 PKN2Q16513 984 aaKnown RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 RNASEH2BQ5TBB1 312 aaKnown RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 RNF220Q5VTB9 566 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 SPOCD1Q6ZMY3 1216 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 NLRP9Q7RTR0 991 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 POLNQ7Z5Q5 900 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 MCEEQ96PE7 176 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 TINF2Q9BSI4 451 aa15.39■□□□□ 0.05
PRKN-204ENST00000366896 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
PRKN-204ENST00000366896 hCG_1818297A0A087WSY0 165 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 GPR25O00155 361 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 BANF1O75531 89 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SNAI1O95863 264 aaPredicted RBP15.38■□□□□ 0.05
PRKN-204ENST00000366896 CYP2B6P20813 491 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 RPA3P35244 121 aaPredicted RBP15.38■□□□□ 0.05
PRKN-204ENST00000366896 SP2Q02086 613 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 RFWD3Q6PCD5 774 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 OTOAQ7RTW8 1153 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 MRRFQ96E11 262 aaKnown RBP15.38■□□□□ 0.05
PRKN-204ENST00000366896 APBA2Q99767 749 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 KATNBL1Q9H079 304 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 MAFBQ9Y5Q3 323 aaPredicted RBP15.38■□□□□ 0.05
PRKN-204ENST00000366896 SMAPO00193 183 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 NCOA4Q13772 614 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SLC1A5Q15758 541 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SLC5A9Q2M3M2 681 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 TFDP3Q5H9I0 405 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 EFHC2Q5JST6 749 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 CENPUQ71F23 418 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 CLNKQ7Z7G1 428 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 C4orf33Q8N1A6 199 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 DEPTORQ8TB45 409 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 TRAPPC9Q96Q05 1148 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SMC6Q96SB8 1091 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 CADM1Q9BY67 442 aaKnown RBP15.38■□□□□ 0.05
PRKN-204ENST00000366896 IMPG2Q9BZV3 1241 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 FLRT1Q9NZU1 646 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 SCOCQ9UIL1 159 aa15.38■□□□□ 0.05
PRKN-204ENST00000366896 TTLL13PA6NNM8 815 aa15.37■□□□□ 0.05
PRKN-204ENST00000366896 K7ERI5 159 aa15.37■□□□□ 0.05
PRKN-204ENST00000366896 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
PRKN-204ENST00000366896 GSTA2P09210 222 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms