RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 LILRB3O75022 631 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 ATP2C2O75185 946 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 INHAP05111 366 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 RWDD2BP57060 319 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 FAAP100Q0VG06 881 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 RASA2Q15283 850 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 C5orf22Q49AR2 442 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 SNX30Q5VWJ9 437 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 MFSD14CQ5VZR4 134 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 PPP1R16BQ96T49 567 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 C11orf70Q9BRQ4 267 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 NT5C1AQ9BXI3 368 aa9.79□□□□□ -0.84
CNIH4-202ENST00000366857 ZMYND10O75800 440 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 FGFR3P22607 806 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 ITGB8P26012 769 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 HSD17B3P37058 310 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 GDF10P55107 478 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 ZNF844Q08AG5 666 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 SYDE1Q6ZW31 735 aaPredicted RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 DDX42Q86XP3 938 aaKnown RBP eCLIP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 PSTKQ8IV42 348 aaKnown RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 RHOT1Q8IXI2 618 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 TMEM35BQ8NCS4 154 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 HSFY1Q96LI6 401 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 ZIM3Q96PE6 472 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 MCEEQ96PE7 176 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 MRPL47Q9HD33 250 aaKnown RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 TBX21Q9UL17 535 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 FZD10Q9ULW2 581 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 RARBP10826 455 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 PDE4CQ08493 712 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 RSPO2Q6UXX9 243 aaPredicted RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 RCOR2Q8IZ40 523 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 OSER1Q9NX31 292 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 ARHGEF38Q9NXL2 777 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 MYO1FO00160 1098 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 TLR3O15455 904 aaKnown RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 HEXIM1O94992 359 aaKnown RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 RAB27AP51159 221 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 MRPS25P82663 173 aaKnown RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 CA9Q16790 459 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 TEX35Q5T0J7 233 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 TMEM86AQ8N2M4 240 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 FRMD8P1Q9BZ68 369 aaPredicted RBP9.78□□□□□ -0.84
CNIH4-202ENST00000366857 WBP1LQ9NX94 342 aa9.78□□□□□ -0.84
CNIH4-202ENST00000366857 MED7O43513 233 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 CD52P31358 61 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 NSFP46459 744 aaKnown RBP9.77□□□□□ -0.84
CNIH4-202ENST00000366857 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.84
CNIH4-202ENST00000366857 KCNJ11Q14654 390 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 GNASQ5JWF2 1037 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 MFSD5Q6N075 450 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 CCDC43Q96MW1 224 aaKnown RBP9.77□□□□□ -0.84
CNIH4-202ENST00000366857 UROC1Q96N76 676 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 TOX2Q96NM4 488 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 ACBD6Q9BR61 282 aa9.77□□□□□ -0.84
CNIH4-202ENST00000366857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-202ENST00000366857 ESYT3A0FGR9 886 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 DCLK1O15075 740 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 RALAP11233 206 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TYMPP19971 482 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 MIPP30301 263 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 MLH1P40692 756 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TERF2Q15554 542 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PCSK9Q8NBP7 692 aaKnown RBP9.77□□□□□ -0.85
CNIH4-202ENST00000366857 P2RY11Q96G91 374 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 ZNF333Q96JL9 665 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TMEM209Q96SK2 561 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TRIM51Q9BSJ1 452 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TMBIM4Q9HC24 238 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PARP2Q9UGN5 583 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PTCH2Q9Y6C5 1203 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 KCNU1A8MYU2 1149 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 NRP1O14786 923 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 GREM1O60565 184 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PEX11BO96011 259 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PECAM1P16284 738 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-202ENST00000366857 GRIK3Q13003 919 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 MESDQ14696 234 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 PRKD1Q15139 912 aaPredicted RBP9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TFDP3Q5H9I0 405 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 ALS2CLQ60I27 953 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 STRADAQ7RTN6 431 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 ZNF280BQ86YH2 543 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 RSPH1Q8WYR4 309 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 FATE1Q969F0 183 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 TRPV6Q9H1D0 765 aa9.77□□□□□ -0.85
CNIH4-202ENST00000366857 DAB1O75553 588 aa9.76□□□□□ -0.85
CNIH4-202ENST00000366857 CCDC130P13994 396 aa9.76□□□□□ -0.85
CNIH4-202ENST00000366857 CHKAP35790 457 aa9.76□□□□□ -0.85
CNIH4-202ENST00000366857 NOMO1Q15155 1222 aa9.76□□□□□ -0.85
CNIH4-202ENST00000366857 HDXQ7Z353 690 aa9.76□□□□□ -0.85
CNIH4-202ENST00000366857 PCDH19Q8TAB3 1148 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms