RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CSH1P0DML2 217 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CSH2P0DML3 217 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 PFKFB1P16118 471 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CMA1P23946 247 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 LMO2P25791 158 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 PCSK1P29120 753 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 PTSQ03393 145 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 TAF12Q16514 161 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 ARHGAP29Q52LW3 1261 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 WDR44Q5JSH3 913 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 SDHAF4Q5VUM1 108 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 ZC3H14Q6PJT7 736 aaKnown RBP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 HS2ST1Q7LGA3 356 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CEP57L1Q8IYX8 460 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CMTM8Q8IZV2 173 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 KIAA0895Q8NCT3 520 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 BPIFB1Q8TDL5 484 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 FAM3CQ92520 227 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 NELL1Q92832 810 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 TRMT2BQ96GJ1 504 aaKnown RBP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 PAGE5Q96GU1 130 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 ZFYVE19Q96K21 471 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 MYRFLQ96LU7 910 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 GCNAQ96QF7 691 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 CRTAC1Q9NQ79 661 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 PRMT8Q9NR22 394 aaPredicted RBP11.89□□□□□ -0.51
H3F3A-203ENST00000366815 ZMYM5Q9UJ78 669 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 HPSEQ9Y251 543 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 NME7Q9Y5B8 376 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 SPTBN4Q9H254 2564 aa11.89□□□□□ -0.51
H3F3A-203ENST00000366815 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 HELZP42694 1942 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 FAM237AA0A1B0GTK4 181 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SLC38A8A6NNN8 435 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 ATP2C2O75185 946 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 LMNAP02545 664 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 CHRNB1P11230 501 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 TNNI1P19237 187 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 CCNE1P24864 410 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 MAGEA11P43364 429 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SOX9P48436 509 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 STK4Q13043 487 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 MTAPQ13126 283 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 DDR2Q16832 855 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SPATA2LQ8IUW3 424 aaPredicted RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 MAB21L3Q8N8X9 362 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 ZBTB44Q8NCP5 570 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 PLEKHO2Q8TD55 490 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 CSGALNACT1Q8TDX6 532 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 FNBP1Q96RU3 617 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SYT15Q9BQS2 421 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 C8orf33Q9H7E9 229 aaPredicted RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 USP25Q9UHP3 1055 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 CDH9Q9ULB4 789 aa11.88□□□□□ -0.51
H3F3A-203ENST00000366815 R3HCC1Q9Y3T6 440 aaKnown RBP11.88□□□□□ -0.51
H3F3A-203ENST00000366815 SPECC1L-ADORA2AF8WAN1 911 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 SPINT1O43278 529 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TACC1O75410 805 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TDGF1P13385 188 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 CLDN10P78369 228 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 CSTF1Q05048 431 aaKnown RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TNK2Q07912 1038 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 PSMD2Q13200 908 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 GAS6Q14393 721 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 C1orf228Q6PIY5 440 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 MON1AQ86VX9 555 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 CELF5Q8N6W0 485 aaKnown RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 SUMF1Q8NBK3 374 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 RIN3Q8TB24 985 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 USP13Q92995 863 aaPredicted RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 MYLPFQ96A32 169 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 MRPL45Q9BRJ2 306 aaKnown RBP11.87□□□□□ -0.51
H3F3A-203ENST00000366815 IER2Q9BTL4 223 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 XYLT2Q9H1B5 865 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 KCTD10Q9H3F6 313 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 LMAN1LQ9HAT1 526 aa11.87□□□□□ -0.51
H3F3A-203ENST00000366815 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms