RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PLK5Q496M5 336 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 RESP18Q5W5W9 173 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 LMBRD2Q68DH5 695 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 OSTM1Q86WC4 334 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 FNBP1Q96RU3 617 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 MMS19Q96T76 1030 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 EDEM2Q9BV94 578 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 GOLPH3LQ9H4A5 285 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 PCIF1Q9H4Z3 704 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 SIX4Q9UIU6 781 aa13.23□□□□□ -0.29
MRPL55-209ENST00000366735 MAP1BP46821 2468 aaKnown RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-209ENST00000366735 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 UBE4BO95155 1302 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 WARSP23381 471 aaKnown RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 WNT7BP56706 349 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 HSF5Q4G112 596 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 FMR1NBQ8N0W7 255 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 CXorf38Q8TB03 319 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 RIN3Q8TB24 985 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 SPACA7Q96KW9 195 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 SLITRK1Q96PX8 696 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 DUSP15Q9H1R2 295 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 PI4KAP42356 2102 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 ABCA7Q8IZY2 2146 aa13.22□□□□□ -0.29
MRPL55-209ENST00000366735 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
MRPL55-209ENST00000366735 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 KRT37O76014 449 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 CAVIN2O95810 425 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 BDNFP23560 247 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 PMLP29590 882 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 EIF2DP41214 584 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 DPP6P42658 865 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 TNNC1P63316 161 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 NOP14P78316 857 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 MRPS21P82921 87 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 SHC2P98077 582 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 PREPLQ4J6C6 727 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 SHC4Q6S5L8 630 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 ZSWIM2Q8NEG5 633 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 CNOT6LQ96LI5 555 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 CYP2S1Q96SQ9 504 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 TTLL2Q9BWV7 592 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 NUP62CLQ9H1M0 184 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 FBRSL1Q9HCM7 1045 aaKnown RBP13.21□□□□□ -0.29
MRPL55-209ENST00000366735 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 MMP17Q9ULZ9 603 aa13.21□□□□□ -0.29
MRPL55-209ENST00000366735 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.3
MRPL55-209ENST00000366735 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 LEFTY2O00292 366 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 CLSTN1O94985 981 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 ADH1CP00326 375 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 APODP05090 189 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 PFKFB1P16118 471 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 TNNI1P19237 187 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 NDUFA8P51970 172 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 SNRPFP62306 86 aaKnown RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 SLC7A9P82251 487 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 TDRD10Q5VZ19 366 aaKnown RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 LRSAM1Q6UWE0 723 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 HS2ST1Q7LGA3 356 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 PDILTQ8N807 584 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 OR5B17Q8NGF7 314 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 C8orf48Q96LL4 319 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 POLMQ9NP87 494 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-209ENST00000366735 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
MRPL55-209ENST00000366735 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms