RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PTDSS1P48651 473 aaKnown RBP5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 FAM193AP78312 1265 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 E2F1Q01094 437 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 SRSF4Q08170 494 aaKnown RBP5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 SEMA5AQ13591 1074 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 NPY5RQ15761 445 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 CYP1B1Q16678 543 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 AARS2Q5JTZ9 985 aaKnown RBP5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 CEP85Q6P2H3 762 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 UNC13DQ70J99 1090 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 WDR53Q7Z5U6 358 aaPredicted RBP5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 VOPP1Q96AW1 172 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 PPP1R9BQ96SB3 815 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 XPNPEP3Q9NQH7 507 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 PRDM11Q9NQV5 511 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 TRMT13Q9NUP7 481 aaKnown RBP5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 CHPF2Q9P2E5 772 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 MID2Q9UJV3 735 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 SH2B3Q9UQQ2 575 aa5.54□□□□□ -1.52
RNU4-28P-201ENST00000364739 CGB1A6NKQ9 187 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 EXOC3O60645 756 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 STK3Q13188 491 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 CYP2W1Q8TAV3 490 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 PRR25Q96S07 402 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 FSD1LQ9BXM9 530 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 TBC1D23Q9NUY8 699 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
RNU4-28P-201ENST00000364739 LOC102723971A0A1B0GUV8 181 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 MBD3L4A6NDZ8 208 aaPredicted RBP5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 MBD3L3A6NE82 208 aaPredicted RBP5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 AGPSO00116 658 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 RRP9O43818 475 aaKnown RBP5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 JTBO76095 146 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 NPSP0C0P6 89 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 KLRC1P26715 233 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 PRKAR1BP31321 381 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 UQCRC1P31930 480 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 ABCG1P45844 678 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 TPTEP56180 551 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 CCNIQ14094 377 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 SLC29A2Q14542 456 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 KCNAB1Q14722 419 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 FCRL6Q6DN72 434 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 DGKHQ86XP1 1220 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 RP9Q8TA86 221 aaKnown RBP5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 HASPINQ8TF76 798 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 TBC1D5Q92609 795 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 CORO2BQ9UQ03 480 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 DRG1Q9Y295 367 aaKnown RBP5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 SNX13Q9Y5W8 968 aa5.52□□□□□ -1.53
RNU4-28P-201ENST00000364739 PQBP1O60828 265 aaKnown RBP5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 PRKCGP05129 697 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 TXNP10599 105 aaKnown RBP5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 ALDH5A1P51649 535 aaPredicted RBP5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 BCAT1P54687 386 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 FOXF2Q12947 444 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 ARHGEF7Q14155 803 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 INSCQ1MX18 579 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 PROSER3Q2NL68 480 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 CERCAMQ5T4B2 595 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 PRAMEF17Q5VTA0 474 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 RRAGBQ5VZM2 374 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 ABHD11Q8NFV4 315 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 SH2D3AQ9BRG2 576 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 TRIM5Q9C035 493 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 GABRQQ9UN88 632 aa5.51□□□□□ -1.53
RNU4-28P-201ENST00000364739 TISP43B9A030 160 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 CES2O00748 559 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 PIAS2O75928 621 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 YY1P25490 414 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 MPGP29372 298 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 NTSR1P30989 418 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 PIK3CBP42338 1070 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 HOXA4Q00056 320 aaPredicted RBP5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 PSG6Q00889 435 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 GRM1Q13255 1194 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 ZNF750Q32MQ0 723 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 TBC1D25Q3MII6 688 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 RNASE12Q5GAN4 147 aaKnown RBP5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 CHSY1Q86X52 802 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 SRRM1Q8IYB3 904 aaKnown RBP5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 C11orf44Q8N8P7 122 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 SEMA6DQ8NFY4 1073 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 SNX22Q96L94 193 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 USP22Q9UPT9 525 aa5.5□□□□□ -1.53
RNU4-28P-201ENST00000364739 CD3EAPO15446 510 aaKnown RBP5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 PMPCBO75439 489 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 MT-ND5P03915 603 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 CYP2D6P10635 497 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 TPH1P17752 444 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 ACVR2AP27037 513 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 GKP32189 559 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 CARSP49589 748 aaKnown RBP5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 CPT1AP50416 773 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 KLHDC7AQ5VTJ3 777 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 ZKSCAN2Q63HK3 967 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 PLAG1Q6DJT9 500 aa5.49□□□□□ -1.53
RNU4-28P-201ENST00000364739 ZNF66Q6ZN08 573 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms