RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 BARX2Q9UMQ3 279 aaPredicted RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 SCN1AP35498 2009 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 PODXLO00592 558 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 DAPK3O43293 454 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 SKAP2O75563 359 aaPredicted RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 IGFBP6P24592 240 aaPredicted RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 RFC2P35250 354 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 FNTAP49354 379 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 IKBKEQ14164 716 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 OTOP2Q7RTS6 562 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 DPF3Q92784 378 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 ERP44Q9BS26 406 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 TMEM161AQ9NX61 479 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 WDR35Q9P2L0 1181 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 UBQLN1Q9UMX0 589 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 HMGB1P1B2RPK0 211 aaPredicted RBP14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 MYZAPP0CAP1 466 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 SIX1Q15475 284 aaPredicted RBP14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 CNGA2Q16280 664 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 ODF2Q5BJF6 829 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 DUPD1Q68J44 220 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 DENND1BQ6P3S1 775 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 C16orf59Q7L2K0 433 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 KATNAL2Q8IYT4 538 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 TNS4Q8IZW8 715 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 BEST2Q8NFU1 509 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 PAAF1Q9BRP4 392 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 ELOVL4Q9GZR5 314 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 LRRC19Q9H756 370 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 PCDHB7Q9Y5E2 793 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 TDRD15B5MCY1 1934 aaKnown RBP14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 ATP2C2O75185 946 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 EOMESO95936 686 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 THP07101 528 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 RARAP10276 462 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 GBP1P32455 592 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 PTGIRP43119 386 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 ZNF844Q08AG5 666 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 PIGHQ14442 188 aaPredicted RBP14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 QPCTQ16769 361 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 LRRC38Q5VT99 294 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 ZDHHC14Q8IZN3 488 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 LRRC52Q8N7C0 313 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 CABS1Q96KC9 395 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 HTATIP2Q9BUP3 242 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 LRFN2Q9ULH4 789 aa14.55□□□□□ -0.08
CSNK1E-201ENST00000359867 CASTOR2A6NHX0 329 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 COILP38432 576 aaPredicted RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 DEFB103AP81534 67 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 FAM117BQ6P1L5 589 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 CCDC137Q6PK04 289 aaKnown RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 GLB1LQ6UWU2 654 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 JAMLQ86YT9 394 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 NIPA2Q8N8Q9 360 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 EXD1Q8NHP7 514 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 LRRC45Q96CN5 670 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 HCSTQ9UBK5 93 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 LTBP2Q14767 1821 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 ANKRD33BA6NCL7 494 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 H0YGN5 161 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 B4GALT3O60512 393 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 IRX1P78414 480 aaPredicted RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 ZNF268Q14587 947 aaPredicted RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 STILQ15468 1287 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 SPRED3Q2MJR0 410 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 DCUN1D2Q6PH85 259 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 CRIPAKQ8N1N5 446 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 ZNF483Q8TF39 744 aaPredicted RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 SLCO2A1Q92959 643 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 C18orf8Q96DM3 657 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 TWNKQ96RR1 684 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 TRIM51Q9BSJ1 452 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 IL23AQ9NPF7 189 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 NOVA2Q9UNW9 492 aaKnown RBP14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 NFS1Q9Y697 457 aa14.54□□□□□ -0.08
CSNK1E-201ENST00000359867 SIGLEC16A6NMB1 481 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 CETN2P41208 172 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 RPL7AP62424 266 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 FPGSQ05932 587 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 C9orf57Q5W0N0 161 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 UBN1Q9NPG3 1134 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 TCRBV7S2A1N4TA0A589 114 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 A6NNZ2 444 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 XPOTO43592 962 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 MICAL2O94851 1124 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 GABRB2P47870 512 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 CLCNKBP51801 687 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 TAS2R40P59535 323 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 ZKSCAN8Q15776 578 aaPredicted RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 TUBB8Q3ZCM7 444 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 PREPLQ4J6C6 727 aaPredicted RBP14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 PTPN20Q4JDL3 420 aa14.53□□□□□ -0.08
CSNK1E-201ENST00000359867 PAN2Q504Q3 1202 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms