RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 LTKP29376 864 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF423Q2M1K9 1284 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM83EQ2M2I3 478 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ZBTB8BQ8NAP8 495 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 FAM167BQ9BTA0 163 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ACSS3Q9H6R3 686 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ESYT3A0FGR9 886 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 DGAT1O75907 488 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 ME2P23368 584 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 RFC5P40937 340 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 AGAP9Q5VTM2 703 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SYCE2Q6PIF2 218 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 PIWIL4Q7Z3Z4 852 aaKnown RBP4.27□□□□□ -1.73
SYNE2-204ENST00000358025 SNX31Q8N9S9 440 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TGFBRAP1Q8WUH2 860 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 TTC17Q96AE7 1141 aa4.27□□□□□ -1.73
SYNE2-204ENST00000358025 H3BRJ5 948 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 BBS9Q3SYG4 887 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 C4orf19Q8IY42 314 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 HAO1Q9UJM8 370 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CDYLQ9Y232 598 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CNTNAP5Q8WYK1 1306 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ADAMTS13Q76LX8 1427 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PLK4O00444 970 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TOM1O60784 492 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MED26O95402 600 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 BLVRAP53004 296 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 UNC45BQ8IWX7 931 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 OR9Q1Q8NGQ5 310 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 USP33Q8TEY7 942 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SKA1Q96BD8 255 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM47Q9BQJ4 181 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RCOR3Q9P2K3 495 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CNOT11Q9UKZ1 510 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TNFAIP2Q03169 654 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 GRIK2Q13002 908 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TNFAIP1Q13829 316 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 OSCP1Q8WVF1 389 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DENND2DQ9H6A0 471 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 STOML2Q9UJZ1 356 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MINPP1Q9UNW1 487 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ITM2BQ9Y287 266 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 H7C0S8 307 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 APOL1O14791 398 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DDHD2O94830 711 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PARNO95453 639 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MAP3K7CLP57077 242 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 IRAK1BP1Q5VVH5 260 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SHCBP1Q8NEM2 672 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF594Q96JF6 807 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 UBE2OQ9C0C9 1292 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 GPIP06744 558 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PPATQ06203 517 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 IKBIPQ70UQ0 350 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ULK2Q8IYT8 1036 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF34Q8IZ26 560 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJC19Q96DA6 116 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 KCTD10Q9H3F6 313 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 KRT1P04264 644 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 LYNP07948 512 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FCHO2Q0JRZ9 810 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 HNRNPDQ14103 355 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SDR42E1Q8WUS8 393 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SLC44A1Q8WWI5 657 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 EEF2KMTQ96G04 330 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 S100A14Q9HCY8 104 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CARD8Q9Y2G2 431 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RAB27AP51159 221 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SEL1L3Q68CR1 1132 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NCAPG2Q86XI2 1143 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PPM1NQ8N819 430 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 TP53INP1Q96A56 240 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 MRM3Q9HC36 420 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SIGLEC16A6NMB1 481 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 M0QX08 132 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 HNRNPDLO14979 420 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CD3EAPO15446 510 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CYP19A1P11511 503 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 S100A5P33763 92 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 FAM43BQ6ZT52 329 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 NANOGNBQ7Z5D8 188 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PGAM4Q8N0Y7 254 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJB8Q8NHS0 232 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SMYD3Q9H7B4 428 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 DLG5Q8TDM6 1919 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 WDR91A4D1P6 747 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 PROSCO94903 275 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CBLBQ13191 982 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZBED5Q49AG3 693 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 KCTD21Q4G0X4 260 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 HGSNATQ68CP4 663 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 ZDHHC18Q9NUE0 388 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 LOC102724428A0A0B4J2F2 783 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 CDK9P50750 372 aaKnown RBP4.26□□□□□ -1.73
SYNE2-204ENST00000358025 RAD23AP54725 363 aa4.26□□□□□ -1.73
SYNE2-204ENST00000358025 SIK1P57059 783 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms