RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 DGCR14Q96DF8 476 aaKnown RBP11.12□□□□□ -0.63
CAPN3-205ENST00000357568 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 NMUR2Q9GZQ4 415 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 PNPLA8Q9NP80 782 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-205ENST00000357568 SLC17A7Q9P2U7 560 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 I3L4J1 428 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 CXCL11O14625 94 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 PYGBP11216 843 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 AOC1P19801 751 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 TAP1Q03518 808 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 RBM15BQ8NDT2 890 aaKnown RBP11.12□□□□□ -0.63
CAPN3-205ENST00000357568 FEZF2Q8TBJ5 459 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 SLC44A1Q8WWI5 657 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 LENG1Q96BZ8 264 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-205ENST00000357568 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 CCDC106Q9BWC9 280 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 PARVAQ9NVD7 372 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 SLC7A8Q9UHI5 535 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 ZNF180Q9UJW8 692 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
CAPN3-205ENST00000357568 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 MAFGO15525 162 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 SERPINA6P08185 405 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 SLC10A3P09131 477 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 NOMO3P69849 1222 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 JAG1P78504 1218 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 BTKQ06187 659 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 TFDP1Q14186 410 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 KLC3Q6P597 504 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 C15orf39Q6ZRI6 1047 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 SPATA24Q86W54 205 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 NLRP4Q96MN2 994 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 C1orf112Q9NSG2 853 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 AFG3L2Q9Y4W6 797 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 UTRNP46939 3433 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 C19orf81C9J6K1 198 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ZBTB39O15060 712 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ZSCAN9O15535 394 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ZCCHC18P0CG32 403 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 KRT5P13647 590 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ABCD1P33897 745 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 CCNFP41002 786 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 RASAL3Q86YV0 1011 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 TMEM126BQ8IUX1 230 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-205ENST00000357568 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 NIPA2Q8N8Q9 360 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 CLMNQ96JQ2 1002 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 ZNF577Q9BSK1 485 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 KLHL4Q9C0H6 718 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 FAM96AQ9H5X1 160 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 TIMMDC1Q9NPL8 285 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 CNTN6Q9UQ52 1028 aa11.11□□□□□ -0.63
CAPN3-205ENST00000357568 H3BRJ5 948 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 BIRC5O15392 142 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CHMP2AO43633 222 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 KRT1P04264 644 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ITGA2BP08514 1039 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 POLR2MP0CAP2 368 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CLDN10P78369 228 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 SULT2A1Q06520 285 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 CYP24A1Q07973 514 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 LLGL1Q15334 1064 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ANKRD20A4Q4UJ75 823 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 TFDP3Q5H9I0 405 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 C1orf146Q5VVC0 180 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 C3orf62Q6ZUJ4 267 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 RASSF3Q86WH2 238 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ABRAQ8N0Z2 381 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 GLIS1Q8NBF1 620 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
CAPN3-205ENST00000357568 PRR11Q96HE9 360 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-205ENST00000357568 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
CAPN3-205ENST00000357568 SIRPGQ9P1W8 387 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms