RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 LRRN4Q8WUT4 740 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PSPC1Q8WXF1 523 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 NUF2Q9BZD4 464 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 KLHL4Q9C0H6 718 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PRPSAP2O60256 369 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PSMD10O75832 226 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 CSPG5O95196 566 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 ABHD2P08910 425 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 T-ENOLP0DO92 83 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 KRT76Q01546 638 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 GAD2Q05329 585 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 ITKQ08881 620 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 TMCO5AQ8N6Q1 288 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 MXRA8Q9BRK3 442 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 KLC2Q9H0B6 622 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 LMCD1Q9NZU5 365 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 ANKRD33BA6NCL7 494 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PABPN1LA6NDY0 278 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 FAM155BO75949 473 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 MRPS9P82933 396 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 OCRLQ01968 901 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 NCOA4Q13772 614 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 GRIP2Q9C0E4 1043 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 RPF1Q9H9Y2 349 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 DDX56Q9NY93 547 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 SOX13Q9UN79 622 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 AVILO75366 819 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 KCNA4P22459 653 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 NANOGNBQ7Z5D8 188 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 OR6Y1Q8NGX8 325 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ZNF395Q9H8N7 513 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 ARHGAP10A1A4S6 786 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 CYB561D2O14569 222 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ALOX15BO15296 676 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 RAG1P15918 1043 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 JAK3P52333 1124 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 CUL2Q13617 745 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 TTC39BQ5VTQ0 682 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 ANKRD22Q5VYY1 191 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 RAPH1Q70E73 1250 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ZC3H3Q8IXZ2 948 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 APOPT1Q96IL0 206 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 DMAC2Q9NW81 257 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 BCAP29Q9UHQ4 241 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 FDX1P10109 184 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 TYK2P29597 1187 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 NRLP54845 237 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 BCAR1P56945 870 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 PRAMEP78395 509 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 CYP24A1Q07973 514 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 MOGSQ13724 837 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 TBC1D25Q3MII6 688 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 DNAAF3Q8N9W5 541 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 NOL3O60936 208 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 OSBPP22059 807 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 SLC12A2P55011 1212 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 LCA5Q86VQ0 697 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 LENG9Q96B70 501 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 PRPF18Q99633 342 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
BDNF-202ENST00000356660 ADA2Q9NZK5 511 aa13.04□□□□□ -0.32
BDNF-202ENST00000356660 FKBP6O75344 327 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 NR3C2P08235 984 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 MX2P20592 715 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 INHBEP58166 350 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
BDNF-202ENST00000356660 SGSM1Q2NKQ1 1148 aa13.03□□□□□ -0.32
BDNF-202ENST00000356660 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms