RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MAPRE1Q15691 268 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CFAP221Q4G0U5 840 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CCDC40Q4G0X9 1142 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 C12orf56Q8IXR9 622 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CMTM8Q8IZV2 173 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 THG1LQ9NWX6 298 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 GTSE1Q9NYZ3 720 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ZMYM5Q9UJ78 669 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ZFHX2Q9C0A1 2572 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 KIF2AO00139 706 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 PES1O00541 588 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ATP2C2O75185 946 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CST3P01034 146 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 NR3C1P04150 777 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 HMGA1P17096 107 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 DDX6P26196 483 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 GRIK1P39086 918 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 MYL6P60660 151 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 E4F1Q66K89 784 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 TXNDC8Q6A555 127 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 C1orf228Q6PIY5 440 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 TMTC1Q8IUR5 882 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 SLC9A9Q8IVB4 645 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CELF5Q8N6W0 485 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 MSANTD3Q96H12 275 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 PKMYT1Q99640 499 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 SLC46A2Q9BY10 475 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 EDEM3Q9BZQ6 932 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 TTYH3Q9C0H2 523 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 C8orf33Q9H7E9 229 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 LUC7L2Q9Y383 392 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 MIA3Q5JRA6 1907 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 GOLGA6L9A6NEM1 432 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 A8MXQ7 604 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 ARNTLO00327 626 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 LMNAP02545 664 aaKnown RBP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 F11P03951 625 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 CKMP06732 381 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 BDNFP23560 247 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 GNL1P36915 607 aaPredicted RBP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 RPS9P46781 194 aaKnown RBP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 TNK2Q07912 1038 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 SYCP1Q15431 976 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 CC2D1AQ6P1N0 951 aaPredicted RBP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 TSSK4Q6SA08 328 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 SCARA5Q6ZMJ2 495 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 TMEM150AQ86TG1 271 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 CLDN23Q96B33 292 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 EEF2KMTQ96G04 330 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 PCED1BQ96HM7 432 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 LRRC3BQ96PB8 259 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 DNAJC7Q99615 494 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 LMAN1LQ9HAT1 526 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 CRTAC1Q9NQ79 661 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 ABHD10Q9NUJ1 306 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 CCL26Q9Y258 94 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 SIK3Q9Y2K2 1263 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
CDRT1-202ENST00000354433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDRT1-202ENST00000354433 TICRRQ7Z2Z1 1910 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 SHISA7A6NL88 538 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 SPECC1L-ADORA2AF8WAN1 911 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TACC1O75410 805 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 NOL4O94818 638 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 ATICP31939 592 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 CTHP32929 405 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 KRT9P35527 623 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 AP3M2P53677 418 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 ZBED6P86452 979 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 IFRD2Q12894 506 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 MTAPQ13126 283 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 LRRC32Q14392 662 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TSR1Q2NL82 804 aaKnown RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TDRD10Q5VZ19 366 aaKnown RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 FAM171BQ6P995 826 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 VSTM1Q6UX27 236 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 MAML2Q8IZL2 1156 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 ZNF397Q8NF99 534 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 OR8K1Q8NGG5 319 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 MYCBPAPQ8TBZ2 947 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TRMT2BQ96GJ1 504 aaKnown RBP12.24□□□□□ -0.45
CDRT1-202ENST00000354433 CHRDQ9H2X0 955 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 SEMA4AQ9H3S1 761 aa12.24□□□□□ -0.45
CDRT1-202ENST00000354433 TDP1Q9NUW8 608 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms