RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 PTGER3P43115 390 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 PAPOLAP51003 745 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 RAD23AP54725 363 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 DMP1Q13316 513 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NKG7Q16617 165 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 LEXMQ3ZCV2 418 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANO1Q5XXA6 986 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TECPR1Q7Z6L1 1165 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 PATL1Q86TB9 770 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPERTQ8NA61 448 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 LEMD2Q8NC56 503 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 OLIG1Q8TAK6 271 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 HMGCLL1Q8TB92 370 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF418Q8TF45 676 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NANOS1Q8WY41 292 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 N4BP2L2Q92802 583 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ATP2A3Q93084 1043 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 HSPBAP1Q96EW2 488 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRMT61AQ96FX7 289 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 UROC1Q96N76 676 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC30A3Q99726 388 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 JPH2Q9BR39 696 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NTMT1Q9BV86 223 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF395Q9H8N7 513 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 RAB6BQ9NRW1 208 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRPM5Q9NZQ8 1165 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 SAE1Q9UBE0 346 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CPNE7Q9UBL6 633 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NCANO14594 1321 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCDC171Q6TFL3 1326 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TMEM247A6NEH6 219 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 WDR64B1ANS9 1081 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 MTSS1O43312 755 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 MBD3O95983 291 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 OR12D1P0DN82 309 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CSRP1P21291 193 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ARNTP27540 789 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBASH3AP57075 661 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 RAC3P60763 192 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 IFI35P80217 286 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 INSM1Q01101 510 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NHLH1Q02575 133 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TAP2Q03519 686 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 DOK7Q18PE1 504 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADNP2Q6IQ32 1131 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 MIS18BP1Q6P0N0 1132 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 RPTNQ6XPR3 784 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TAS1R1Q7RTX1 841 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 BPHLQ86WA6 291 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CEP97Q8IW35 865 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CNTN4Q8IWV2 1026 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 DTWD2Q8NBA8 298 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 EXD1Q8NHP7 514 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 DDX54Q8TDD1 881 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TFB1MQ8WVM0 346 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 MED8Q96G25 268 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCDC34Q96HJ3 373 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZFYVE21Q9BQ24 234 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 FEM1AQ9BSK4 669 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRMT61BQ9BVS5 477 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 ITPAQ9BY32 194 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRIM55Q9BYV6 548 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 C12orf65Q9H3J6 166 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 HSPBP1Q9NZL4 362 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 TBC1D14Q9P2M4 693 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NLKQ9UBE8 527 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NAALADL1Q9UQQ1 740 aa2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 NUP153P49790 1475 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-201ENST00000354268 RGS12O14924 1447 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 ATRNO75882 1429 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 ASB14A6NK59 587 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 GNAT3A8MTJ3 354 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 NOTOA8MTQ0 251 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 H7BY64 318 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC9A3R1O14745 358 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 KIAA0391O15091 583 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 GDF11O95390 407 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC2A4P14672 509 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 GLUD2P49448 558 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 KIF11P52732 1056 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 LIMK1P53667 647 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 GP2P55259 537 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 RNASE9P60153 205 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADAM8P78325 824 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCDC85BQ15834 202 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 AOC3Q16853 763 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 TDRD12Q587J7 1177 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZRANB3Q5FWF4 1079 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 DEF8Q6ZN54 512 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 SSX8Q7RTT4 187 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 TMPRSS9Q7Z410 1059 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 FAM90A1Q86YD7 464 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 NXPE1Q8N323 547 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 HSD17B11Q8NBQ5 300 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 C7orf57Q8NEG2 295 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBA3Q8TBC4 463 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 GANCQ8TET4 914 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 PTPRN2Q92932 1015 aa2.34□□□□□ -2.03
SMARCAD1-201ENST00000354268 TUBGCP3Q96CW5 907 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms