RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ARSEP51690 589 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 MYL7Q01449 175 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 GAD2Q05329 585 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 COG2Q14746 738 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 KCNJ8Q15842 424 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 TPTE2Q6XPS3 522 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 VASH1Q7L8A9 365 aaPredicted RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 KAT5Q92993 513 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 ATP2A3Q93084 1043 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 EME1Q96AY2 570 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 C12orf43Q96C57 262 aaKnown RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 CAAP1Q9H8G2 361 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 PPCSQ9HAB8 311 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 SACM1LQ9NTJ5 587 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 C6orf203Q9P0P8 240 aaPredicted RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 RABGAP1Q9Y3P9 1069 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 ALS2Q96Q42 1657 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 A0A1W2PQ67 120 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A9O60656 530 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 IL1BP01584 269 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A6P19224 532 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A1P22309 533 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A4P22310 534 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A3P35503 534 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A5P35504 534 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 COPAP53621 1224 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 CTBSQ01459 385 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 CREB5Q02930 508 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 ALCAMQ13740 583 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 WDR75Q8IWA0 830 aaKnown RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 RDH13Q8NBN7 331 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 HELQQ8TDG4 1101 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 DCAKDQ8WVC6 231 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 ANKRD36BP1Q96IX9 119 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 SIAEQ9HAT2 523 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A7Q9HAW7 530 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A10Q9HAW8 530 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 UGT1A8Q9HAW9 530 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 LOC100653049A0A140TA62 436 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 IQCA1LA6NCM1 817 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.2
IFT88-202ENST00000351808 GNPATO15228 680 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 AQP9O43315 295 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 KRT34O76011 436 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 BMP3P12645 472 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 TCEA1P23193 301 aaKnown RBP13.77□□□□□ -0.2
IFT88-202ENST00000351808 PRDX6P30041 224 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 MAPK4P31152 587 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.2
IFT88-202ENST00000351808 CYP2J2P51589 502 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 CDH15P55291 814 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 ISOC1Q96CN7 298 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 APOPT1Q96IL0 206 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 WRNIP1Q96S55 665 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 CEP44Q9C0F1 390 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 NYXQ9GZU5 481 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 EHD1Q9H4M9 534 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 COPS7BQ9H9Q2 264 aaPredicted RBP13.77□□□□□ -0.2
IFT88-202ENST00000351808 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 RNF11Q9Y3C5 154 aa13.77□□□□□ -0.2
IFT88-202ENST00000351808 ATP2A1O14983 1001 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 CSDE1O75534 798 aaKnown RBP13.77□□□□□ -0.21
IFT88-202ENST00000351808 PSMC3P17980 439 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 GLRA2P23416 452 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 GJC1P36383 396 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 GSSP48637 474 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 PEX3P56589 373 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 RPS3AP61247 264 aaKnown RBP13.77□□□□□ -0.21
IFT88-202ENST00000351808 UBE2SQ16763 222 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 PHKG1Q16816 387 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 FBXW8Q8N3Y1 598 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
IFT88-202ENST00000351808 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 C20orf27Q9GZN8 174 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 GTF3C4Q9UKN8 822 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 SDR42E2A6NKP2 422 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 SIN3BO75182 1162 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 ZMPSTE24O75844 475 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 FBXO21O94952 628 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 TSPY3P0CV98 308 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 TSPY8P0CW00 308 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 GZMAP12544 262 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 PCYT1AP49585 367 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 SF3B4Q15427 424 aaKnown RBP eCLIP13.77□□□□□ -0.21
IFT88-202ENST00000351808 RWDD4Q6NW29 188 aaKnown RBP13.77□□□□□ -0.21
IFT88-202ENST00000351808 GPR180Q86V85 440 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 C7orf26Q96N11 449 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 VTA1Q9NP79 307 aa13.77□□□□□ -0.21
IFT88-202ENST00000351808 CDC14AQ9UNH5 594 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms