RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ABHD2P08910 425 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 PGM5Q15124 567 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 KIF19Q2TAC6 998 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 MFSD7Q6UXD7 560 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 SPIRE2Q8WWL2 714 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 ZBTB10Q96DT7 871 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 OSBPL7Q9BZF2 842 aa15.33■□□□□ 0.04
NUP50-201ENST00000347635 ASCC2Q9H1I8 757 aaPredicted RBP15.33■□□□□ 0.04
NUP50-201ENST00000347635 TMEM150BA6NC51 233 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 FSCN2O14926 492 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 ATP9AO75110 1047 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 C16orf89Q6UX73 402 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 SLFN11Q7Z7L1 901 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 UBA3Q8TBC4 463 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 RNPEPL1Q9HAU8 725 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 COG5Q9UP83 839 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 PAEPP09466 180 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 CATSPERGQ6ZRH7 1159 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 FAXCQ5TGI0 409 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 RWDD4Q6NW29 188 aaKnown RBP15.32■□□□□ 0.04
NUP50-201ENST00000347635 ELMOD1Q8N336 334 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 VPS39Q96JC1 886 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 AQP5P55064 265 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 SLC34A1Q06495 639 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 NME3Q13232 169 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 VGLL4Q14135 290 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 MFSD5Q6N075 450 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 NOTUMQ6P988 496 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 SHC3Q92529 594 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 PPP1R36Q96LQ0 422 aa15.32■□□□□ 0.04
NUP50-201ENST00000347635 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
NUP50-201ENST00000347635 ALADP13716 330 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 SSTR1P30872 391 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 CASP2P42575 452 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 GTF2BQ00403 316 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 SATB1Q01826 763 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 TMEM132DQ14C87 1099 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 EFTUD2Q15029 972 aaKnown RBP eCLIP15.31■□□□□ 0.042e-7■■■■■ 30.8
NUP50-201ENST00000347635 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 APOPT1Q96IL0 206 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 XAB2Q9HCS7 855 aaKnown RBP15.31■□□□□ 0.04
NUP50-201ENST00000347635 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 NEMP1O14524 444 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 KRT16P08779 473 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 RANBP1P43487 201 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 CLK2P49760 499 aaKnown RBP15.31■□□□□ 0.04
NUP50-201ENST00000347635 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
NUP50-201ENST00000347635 IKZF4Q9H2S9 585 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 ADRA1DP25100 572 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 SLC45A4Q5BKX6 768 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 WDR49Q8IV35 697 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 ZNF606Q8WXB4 792 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
NUP50-201ENST00000347635 CISHQ9NSE2 258 aa15.31■□□□□ 0.04
NUP50-201ENST00000347635 ATP9BO43861 1147 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 SULT1E1P49888 294 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 SCG3Q8WXD2 468 aaKnown RBP15.3■□□□□ 0.04
NUP50-201ENST00000347635 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 CDY2AQ9Y6F7 541 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 CDY1Q9Y6F8 540 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 SLC4A7Q9Y6M7 1214 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 ADCY3O60266 1144 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 BOLA3Q53S33 107 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.3■□□□□ 0.04
NUP50-201ENST00000347635 PIK3R5Q8WYR1 880 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 LRCH1Q9Y2L9 728 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 RIPK1Q13546 671 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 MAPRE2Q15555 327 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 NT5C1AQ9BXI3 368 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 FSD1LQ9BXM9 530 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 ABHD16BQ9H3Z7 469 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 IL1RAPL1Q9NZN1 696 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 GLRA3O75311 464 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 CALCAP01258 141 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 ZSCAN5DPP0CG00 497 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 CDC25CP30307 473 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 RYBPQ8N488 228 aaPredicted RBP15.3■□□□□ 0.04
NUP50-201ENST00000347635 TMEM109Q9BVC6 243 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 USP18Q9UMW8 372 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 LOC100653049A0A140TA62 436 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 AIM2O14862 343 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 OGTO15294 1046 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 LIASO43766 372 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 KRT34O76011 436 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 POLBP06746 335 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 EEF1B2P24534 225 aaKnown RBP15.3■□□□□ 0.04
NUP50-201ENST00000347635 SERPINB3P29508 390 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 SKIV2L2P42285 1042 aaKnown RBP15.3■□□□□ 0.04
NUP50-201ENST00000347635 CDK16Q00536 496 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 MAMLD1Q13495 774 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 TRMT5Q32P41 509 aaKnown RBP15.3■□□□□ 0.04
NUP50-201ENST00000347635 IZUMO2Q6UXV1 221 aa15.3■□□□□ 0.04
NUP50-201ENST00000347635 APBB2Q92870 758 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms