RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ACTL7BQ9Y614 415 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 MGEA5O60502 916 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 MAP4P27816 1152 aaKnown RBP11.31□□□□□ -0.6
RPL28-201ENST00000344063 PPATQ06203 517 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 ARHGEF6Q15052 776 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 NFIL3Q16649 462 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 DACT2Q5SW24 774 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 TRIM15Q9C019 465 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 MTMR12Q9C0I1 747 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 C10orf88Q9H8K7 445 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 GTF2BQ00403 316 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 PGM5Q15124 567 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 KATNAL2Q8IYT4 538 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 GCNAQ96QF7 691 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 FBXO6Q9NRD1 293 aaPredicted RBP11.31□□□□□ -0.6
RPL28-201ENST00000344063 CISHQ9NSE2 258 aa11.31□□□□□ -0.6
RPL28-201ENST00000344063 AKAP10O43572 662 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 DLG4P78352 724 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 ZCCHC9Q8N567 271 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 MAGEC3Q8TD91 643 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 PARP4Q9UKK3 1724 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 HBP1O60381 514 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 GRAP2O75791 330 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 TMCC1O94876 653 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 SPRP35270 261 aaPredicted RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 ANO4Q32M45 955 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 FAM81AQ8TBF8 368 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 ART4Q93070 314 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 MRPL1Q9BYD6 325 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 HNRNPRO43390 633 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 GJB6O95452 261 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 LCP1P13796 627 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 RIPK1Q13546 671 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 ACAP1Q15027 740 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 MAPRE2Q15555 327 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 EFHC1Q5JVL4 640 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 CWF19L1Q69YN2 538 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 POTEAQ6S8J7 498 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 SLC26A11Q86WA9 606 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 NDNQ99608 321 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
RPL28-201ENST00000344063 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
RPL28-201ENST00000344063 CHEK2O96017 543 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 SERPINB5P36952 375 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 PDK2Q15119 407 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 SEZ6Q53EL9 994 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 HPDLQ96IR7 371 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 M0R2N6 131 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 TBC1D12O60347 775 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 GCLCP48506 637 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 BNIP1Q12981 228 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 USP4Q13107 963 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 NME3Q13232 169 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 C16orf72Q14CZ0 275 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 Q3C1V9 767 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 DEFB107AQ8IZN7 70 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 INPP5DQ92835 1189 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 APBB2Q92870 758 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 IKZF4Q9H2S9 585 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CCDC134Q9H6E4 229 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ZC4H2Q9NQZ6 224 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CPSF3Q9UKF6 684 aaKnown RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 TISP43B9A030 160 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms