RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NOMO3P69849 1222 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 MRPS35P82673 323 aaKnown RBP7.47□□□□□ -1.21
VCAN-202ENST00000342785 RCN1Q15293 331 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 LRRC38Q5VT99 294 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DENND5BQ6ZUT9 1274 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 CCNJLQ8IV13 435 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 CCDC138Q96M89 665 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 DCLRE1BQ9H816 532 aa7.47□□□□□ -1.21
VCAN-202ENST00000342785 ENO4A6NNW6 628 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 KBTBD13C9JR72 458 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 H3BRB1 525 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 AP3B1O00203 1094 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 PTPRAP18433 802 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 UBA1P22314 1058 aaKnown RBP7.46□□□□□ -1.21
VCAN-202ENST00000342785 FDFT1P37268 417 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 VHLP40337 213 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 NDST1P52848 882 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 RARS2Q5T160 578 aaKnown RBP7.46□□□□□ -1.21
VCAN-202ENST00000342785 SH3BP5LQ7L8J4 393 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 IPMKQ8NFU5 416 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 AFG1LQ8WV93 481 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 TRIM62Q9BVG3 475 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.21
VCAN-202ENST00000342785 MRPL40Q9NQ50 206 aaKnown RBP7.46□□□□□ -1.21
VCAN-202ENST00000342785 DLGAP2Q9P1A6 1054 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 UBA6A0AVT1 1052 aaPredicted RBP7.46□□□□□ -1.21
VCAN-202ENST00000342785 APOC4-APOC2K7ER74 178 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 CCNE2O96020 404 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 APOC2P02655 101 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 FAM200BP0CF97 657 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 PNPLA4P41247 253 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 SV2CQ496J9 727 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 NAPEPLDQ6IQ20 393 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 SLC51AQ86UW1 340 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 APOL2Q9BQE5 337 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 FZD1Q9UP38 647 aa7.46□□□□□ -1.21
VCAN-202ENST00000342785 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 ATICP31939 592 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 CHKAP35790 457 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 PDE1CQ14123 709 aaPredicted RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 PRUNE1Q86TP1 453 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 ATPAF2Q8N5M1 289 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 CYP39A1Q9NYL5 469 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 BARX2Q9UMQ3 279 aaPredicted RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 POLIQ9UNA4 740 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 COG5Q9UP83 839 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TM9SF1O15321 606 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 GLRA3O75311 464 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 ETS1P14921 441 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 CYP2B6P20813 491 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TGM2P21980 687 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 KCNA3P22001 575 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 MMP13P45452 471 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 NSUN2Q08J23 767 aaKnown RBP eCLIP7.46□□□□□ -1.22
VCAN-202ENST00000342785 ZNF235Q14590 738 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 DGKDQ16760 1214 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TDRD10Q5VZ19 366 aaKnown RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 SUGP1Q8IWZ8 645 aaKnown RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 ZSWIM2Q8NEG5 633 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 SARS2Q9NP81 518 aaKnown RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 FER1L4A9Z1Z3 1794 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 CBX6O95503 412 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 COPAP53621 1224 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TEDDM1Q5T9Z0 273 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TEX9Q8N6V9 391 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 TMEM120AQ9BXJ8 343 aa7.46□□□□□ -1.22
VCAN-202ENST00000342785 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
VCAN-202ENST00000342785 CCL15-CCL14A0A0B4J2E2 113 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TCRBV7S2A1N4TA0A589 114 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CLGNO14967 610 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PAEPP09466 180 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SETSIPP0DME0 302 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 MCF2P10911 925 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ALDH5A1P51649 535 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 RPL10AP62906 217 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 MAPRE2Q15555 327 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 CCL15Q16663 113 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TMEM154Q6P9G4 183 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 REPS2Q8NFH8 660 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 ZNF75CPQ92670 426 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 NAF1Q96HR8 494 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 CPB2Q96IY4 423 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 GSTA4O15217 222 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 GFAPP14136 432 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 XPAP23025 273 aaPredicted RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 MMP14P50281 582 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 BCAT1P54687 386 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TAS2R40P59535 323 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 FAAP100Q0VG06 881 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 RASA2Q15283 850 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PPHLN1Q8NEY8 458 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 RMDN1Q96DB5 314 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 TMA16Q96EY4 203 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 SRPK1Q96SB4 655 aaKnown RBP7.45□□□□□ -1.22
VCAN-202ENST00000342785 MROH8Q9H579 483 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 DMAC2Q9NW81 257 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 OPLAHO14841 1288 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 SNX2O60749 519 aa7.45□□□□□ -1.22
VCAN-202ENST00000342785 PIAS1O75925 651 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms