RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CYP3A7P24462 503 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 KCNC4Q03721 635 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 NDUFA5Q16718 116 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 ASPRV1Q53RT3 343 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 RSPH3Q86UC2 560 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 SAMD3Q8N6K7 520 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 CHPT1Q8WUD6 406 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 SRPK1Q96SB4 655 aaKnown RBP19.27■□□□□ 0.67
SMPD1-201ENST00000342245 SLC2A11Q9BYW1 496 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 ARFGEF1Q9Y6D6 1849 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 MEI4A8MW99 385 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 COPEO14579 308 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 CNOT3O75175 753 aaKnown RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 FAM13AO94988 1023 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 GLRA2P23416 452 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 HP1BP3Q5SSJ5 553 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 TPTE2Q6XPS3 522 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 TICAM1Q8IUC6 712 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 ARHGEF19Q8IW93 802 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 NEDD1Q8NHV4 660 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 HGH1Q9BTY7 390 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 GNPTGQ9UJJ9 305 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 GNEQ9Y223 722 aaKnown RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 TBX3O15119 743 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 ARPC4P59998 168 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 KCNA1Q09470 495 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 BST1Q10588 318 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 ADGRE1Q14246 886 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 POU5F2Q8N7G0 328 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 MBOAT7Q96N66 472 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 FHDC1Q9C0D6 1143 aaPredicted RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 DRC3Q9H069 523 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 TUT1Q9H6E5 874 aaKnown RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 PCDH9Q9HC56 1237 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 AGPAT3Q9NRZ7 376 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 GIN1Q9NXP7 522 aa19.26■□□□□ 0.67
SMPD1-201ENST00000342245 HERC5Q9UII4 1024 aaKnown RBP19.26■□□□□ 0.67
SMPD1-201ENST00000342245 IQCA1LA6NCM1 817 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PMM2O15305 246 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PSMC3P17980 439 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 MFAP3P55082 362 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 C21orf59P57076 290 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 OASLQ15646 514 aaKnown RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 EPC2Q52LR7 807 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 SNRNP48Q6IEG0 339 aaKnown RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 SH2D5Q6ZV89 423 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PALM2Q8IXS6 379 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PPP4R1Q8TF05 950 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 KLF6Q99612 283 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 ADAM33Q9BZ11 813 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 ACP6Q9NPH0 428 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 SIRPGQ9P1W8 387 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 CAPNS1P04632 268 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 CYP2C9P11712 490 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 ESRRGP62508 458 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PTK7Q13308 1070 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 AMIGO2Q86SJ2 522 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 WDR75Q8IWA0 830 aaKnown RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 PPM1KQ8N3J5 372 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 RANBP9Q96S59 729 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 ZHX2Q9Y6X8 837 aa19.25■□□□□ 0.67
SMPD1-201ENST00000342245 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
SMPD1-201ENST00000342245 MYH14Q7Z406 1995 aaKnown RBP19.24■□□□□ 0.67
SMPD1-201ENST00000342245 PNMA6FA0A0J9YX94 578 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 PROSCO94903 275 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 CIITAP33076 1130 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 CYP2J2P51589 502 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 RPS3AP61247 264 aaKnown RBP19.24■□□□□ 0.67
SMPD1-201ENST00000342245 PSMC6P62333 389 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 UBAP2LQ14157 1087 aaKnown RBP19.24■□□□□ 0.67
SMPD1-201ENST00000342245 EFTUD2Q15029 972 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD1-201ENST00000342245 RALGPS1Q5JS13 557 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 ANKMY2Q8IV38 441 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 TERB1Q8NA31 727 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 HM13Q8TCT9 377 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 PLEKHA8Q96JA3 519 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 E7ESA3 106 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 SPTLC1O15269 473 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 BMP10O95393 424 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 PROCP04070 461 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 SSTR1P30872 391 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 TEX44Q53QW1 395 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 CENPSQ8N2Z9 138 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 SERPINI1Q99574 410 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 OLFM1Q99784 485 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 GBA3Q9H227 469 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 TPK1Q9H3S4 243 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 ATAD3AQ9NVI7 634 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 MKS1Q9NXB0 559 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 EPS15L1Q9UBC2 864 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 CCPG1Q9ULG6 757 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 DOLKQ9UPQ8 538 aa19.24■□□□□ 0.67
SMPD1-201ENST00000342245 APOBEC2Q9Y235 224 aaKnown RBP19.24■□□□□ 0.67
SMPD1-201ENST00000342245 SNNO75324 88 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms