RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 ST7Q9NRC1 585 aa13.96□□□□□ -0.18
TUBD1-202ENST00000340993 HSFX1Q9UBD0 423 aa13.96□□□□□ -0.18
TUBD1-202ENST00000340993 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.96□□□□□ -0.18
TUBD1-202ENST00000340993 CUL9Q8IWT3 2517 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 SCAMP3O14828 347 aaKnown RBP13.95□□□□□ -0.18
TUBD1-202ENST00000340993 USP17L7P0C7H9 530 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 BCAT1P54687 386 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 GOLGA8FQ08AF8 430 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 GOLGA8DPQ0D2H9 430 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 ARHGAP17Q68EM7 881 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 OTOP3Q7RTS5 596 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 TMEM150AQ86TG1 271 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
TUBD1-202ENST00000340993 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 SEPT11Q9NVA2 429 aaKnown RBP13.95□□□□□ -0.18
TUBD1-202ENST00000340993 NUDT5Q9UKK9 219 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 ASB3Q9Y575 518 aa13.95□□□□□ -0.18
TUBD1-202ENST00000340993 YWHAQP27348 245 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 PTK2Q05397 1052 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 ADIGQ0VDE8 80 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 BST2Q10589 180 aaKnown RBP13.94□□□□□ -0.18
TUBD1-202ENST00000340993 PARM1Q6UWI2 310 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 FAM71AQ8IYT1 594 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 ZSCAN18Q8TBC5 510 aaPredicted RBP13.94□□□□□ -0.18
TUBD1-202ENST00000340993 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 RPP25Q9BUL9 199 aaKnown RBP13.94□□□□□ -0.18
TUBD1-202ENST00000340993 TJP2Q9UDY2 1190 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 CDH7Q9ULB5 785 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 HHLA1C9JL84 531 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 ZNF197O14709 1029 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 TNFRSF10BO14763 440 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 F11P03951 625 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 MMEP08473 750 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 LAMP2P13473 410 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 SOX5P35711 763 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 VIPR2P41587 438 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 PDE6CP51160 858 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 SLC8A3P57103 927 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 LCLAT1Q6UWP7 414 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 RTL10Q7L3V2 364 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 NOP9Q86U38 636 aaKnown RBP13.94□□□□□ -0.18
TUBD1-202ENST00000340993 GJD3Q8N144 294 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 C1orf131Q8NDD1 294 aaKnown RBP13.94□□□□□ -0.18
TUBD1-202ENST00000340993 CLEC4CQ8WTT0 213 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 FGF14Q92915 247 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 SLC22A12Q96S37 553 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 MIS12Q9H081 205 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 MUTYHQ9UIF7 546 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
TUBD1-202ENST00000340993 LRRC53A6NM62 1247 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CYP11B1P15538 503 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CDC25CP30307 473 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 KRT9P35527 623 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 STAT1P42224 750 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 TKTL1P51854 596 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 JAM2P57087 298 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 GRM2Q14416 872 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CNGA2Q16280 664 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 C2CD6Q53TS8 623 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 FAM78AQ5JUQ0 283 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CYP26C1Q6V0L0 522 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 ARL14EPQ8N8R7 260 aaPredicted RBP13.93□□□□□ -0.18
TUBD1-202ENST00000340993 MRPS31Q92665 395 aaKnown RBP13.93□□□□□ -0.18
TUBD1-202ENST00000340993 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 LRRC4Q9HBW1 653 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CSNK1G1Q9HCP0 422 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 SMPD4Q9NXE4 827 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 TRPM5Q9NZQ8 1165 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 CYTH4Q9UIA0 394 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 NUMBLQ9Y6R0 609 aa13.93□□□□□ -0.18
TUBD1-202ENST00000340993 A0A1W2PQH9 124 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 LOC730098B7Z3J9 87 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 NCANO14594 1321 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 XPO1O14980 1071 aaKnown RBP13.92□□□□□ -0.18
TUBD1-202ENST00000340993 MDM4O15151 490 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 MED7O43513 233 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 PRAMEF12O95522 483 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 POU2F2P09086 479 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 EPHA5P54756 1037 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 TANGO2Q6ICL3 276 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 PHLDB2Q86SQ0 1253 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 KHSRPQ92945 711 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■■■■□ 24
TUBD1-202ENST00000340993 SLITRK1Q96PX8 696 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 SLC46A2Q9BY10 475 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 CCSER2Q9H7U1 834 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.92□□□□□ -0.18
TUBD1-202ENST00000340993 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
TUBD1-202ENST00000340993 CCL26Q9Y258 94 aa13.92□□□□□ -0.18
TUBD1-202ENST00000340993 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms