RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TSEN2Q8NCE0 465 aaKnown RBP12.25□□□□□ -0.45
ATXN3-201ENST00000340660 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
ATXN3-201ENST00000340660 SLC25A18Q9H1K4 315 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 ASCL3Q9NQ33 180 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 CLCA2Q9UQC9 943 aa12.25□□□□□ -0.45
ATXN3-201ENST00000340660 FAM86B1E9PN63 330 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 ERLIN2O94905 339 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 AGFG2O95081 481 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 STBD1O95210 358 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 FAM86B2P0C5J1 330 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 CYP4A11Q02928 519 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 SART3Q15020 963 aaKnown RBP12.24□□□□□ -0.45
ATXN3-201ENST00000340660 KIF19Q2TAC6 998 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 EOGTQ5NDL2 527 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 ZKSCAN2Q63HK3 967 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 NIPA1Q7RTP0 329 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
ATXN3-201ENST00000340660 PLA2G4DQ86XP0 818 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 CMTM8Q8IZV2 173 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 ACAP3Q96P50 834 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 MDFIQ99750 246 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 MIR1-1HGQ9H1L0 117 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
ATXN3-201ENST00000340660 SAMM50Q9Y512 469 aa12.24□□□□□ -0.45
ATXN3-201ENST00000340660 IGLV3-22A0A075B6J6 115 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 KCNK3O14649 394 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 BCAT2O15382 392 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 THP07101 528 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 AXLP30530 894 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 CASRP41180 1078 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 CLCNKBP51801 687 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 OXCT1P55809 520 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 GABREP78334 506 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 IL9RQ01113 521 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 MRPL58Q14197 206 aaKnown RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 GAB4Q2WGN9 574 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 CC2D1AQ6P1N0 951 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 DNAJB7Q7Z6W7 309 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 ZNF564Q8TBZ8 553 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 SSC4DQ8WTU2 575 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 RFFLQ8WZ73 363 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 MOCOSQ96EN8 888 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 CNDP2Q96KP4 475 aaKnown RBP12.23□□□□□ -0.45
ATXN3-201ENST00000340660 MAFFQ9ULX9 164 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 SNX11Q9Y5W9 270 aa12.23□□□□□ -0.45
ATXN3-201ENST00000340660 SVILO95425 2214 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 MEI4A8MW99 385 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 PIK3R2O00459 728 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 NDUFS2O75306 463 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 NPTXRO95502 500 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 KIR2DL1P43626 348 aaPredicted RBP12.22□□□□□ -0.45
ATXN3-201ENST00000340660 NT5C2P49902 561 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 CCT8P50990 548 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 EPHB3P54753 998 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
ATXN3-201ENST00000340660 KDM7AQ6ZMT4 941 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 SYT9Q86SS6 491 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 PRPF31Q8WWY3 499 aaKnown RBP12.22□□□□□ -0.45
ATXN3-201ENST00000340660 PSMG2Q969U7 264 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 ZNF577Q9BSK1 485 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 UBAC1Q9BSL1 405 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 PHACTR1Q9C0D0 580 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 TCEAL9Q9UHQ7 104 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 SLCO1B1Q9Y6L6 691 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 ANK1P16157 1881 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 HIVEP3Q5T1R4 2406 aa12.22□□□□□ -0.45
ATXN3-201ENST00000340660 TMEM131Q92545 1883 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 ZNF217O75362 1048 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 FGF19O95750 216 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 ARF4P18085 180 aaPredicted RBP12.21□□□□□ -0.45
ATXN3-201ENST00000340660 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 CSNK1EP49674 416 aaKnown RBP12.21□□□□□ -0.45
ATXN3-201ENST00000340660 INHBCP55103 352 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 PLD1Q13393 1074 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 CTXN3Q4LDR2 81 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 ZNF589Q86UQ0 364 aaPredicted RBP12.21□□□□□ -0.45
ATXN3-201ENST00000340660 SGMS1Q86VZ5 419 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 LSMEM2Q8N112 164 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 OSCP1Q8WVF1 389 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 MIB2Q96AX9 1013 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.45
ATXN3-201ENST00000340660 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 NEUROD4Q9HD90 331 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
ATXN3-201ENST00000340660 DUS2Q9NX74 493 aaKnown RBP12.21□□□□□ -0.45
ATXN3-201ENST00000340660 NBEAL1Q6ZS30 2694 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 E2F8A0AVK6 867 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 WDR64B1ANS9 1081 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 H0Y8X5 98 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 H7C4K7 107 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 HMMRO75330 724 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 LDOC1O95751 146 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-201ENST00000340660 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 BFSP1Q12934 665 aa12.2□□□□□ -0.46
ATXN3-201ENST00000340660 MTF1Q14872 753 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms