RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FAM49BQ9NUQ9 324 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 ZSCAN32Q9NX65 697 aa16.34■□□□□ 0.21
VAPA-201ENST00000340541 UXTQ9UBK9 157 aaPredicted RBP16.34■□□□□ 0.21
VAPA-201ENST00000340541 SOBPA7XYQ1 873 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 HEPACAM2A8MVW5 462 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 TNFRSF10BO14763 440 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 BEST1O76090 585 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 CD72P21854 359 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
VAPA-201ENST00000340541 ANXA13P27216 316 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 CSTF1Q05048 431 aaKnown RBP16.33■□□□□ 0.2
VAPA-201ENST00000340541 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 FZD5Q13467 585 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 CUL2Q13617 745 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 TXNDC8Q6A555 127 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 MON1AQ86VX9 555 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 MFSD6LQ8IWD5 586 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 CMTM8Q8IZV2 173 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 UBR7Q8N806 425 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 SMARCD1Q96GM5 515 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 HNRNPABQ99729 332 aaKnown RBP16.33■□□□□ 0.2
VAPA-201ENST00000340541 SMOQ99835 787 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 MED10Q9BTT4 135 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
VAPA-201ENST00000340541 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.2
VAPA-201ENST00000340541 CSNK1G1Q9HCP0 422 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 ZMYM5Q9UJ78 669 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 MYH10P35580 1976 aa16.33■□□□□ 0.2
VAPA-201ENST00000340541 SHISA7A6NL88 538 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 ARNTLO00327 626 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 P4HA2O15460 535 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
VAPA-201ENST00000340541 DDX6P26196 483 aaKnown RBP eCLIP16.32■□□□□ 0.2
VAPA-201ENST00000340541 ERCC5P28715 1186 aaPredicted RBP16.32■□□□□ 0.2
VAPA-201ENST00000340541 RAD23BP54727 409 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 NRLP54845 237 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 C1orf228Q6PIY5 440 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 ZNF687Q8N1G0 1237 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 TTC39CQ8N584 583 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 MAB21L3Q8N8X9 362 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 SLC4A11Q8NBS3 891 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 MRPS31Q92665 395 aaKnown RBP16.32■□□□□ 0.2
VAPA-201ENST00000340541 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
VAPA-201ENST00000340541 SLC22A12Q96S37 553 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 DMAP1Q9NPF5 467 aaPredicted RBP16.32■□□□□ 0.2
VAPA-201ENST00000340541 OBP2AQ9NY56 170 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 IL37Q9NZH6 218 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
VAPA-201ENST00000340541 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
VAPA-201ENST00000340541 OTOGLQ3ZCN5 2332 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 TICRRQ7Z2Z1 1910 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 FRYLO94915 3013 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 LILRB5O75023 590 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 AP1G2O75843 785 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
VAPA-201ENST00000340541 CCDC192P0DO97 292 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 GDI1P31150 447 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 LRMPQ12912 555 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.28e-10■□□□□ 9.7
VAPA-201ENST00000340541 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 ZNF394Q53GI3 561 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 NUP93Q8N1F7 819 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 RIN3Q8TB24 985 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
VAPA-201ENST00000340541 SECISBP2LQ93073 1101 aaKnown RBP16.31■□□□□ 0.2
VAPA-201ENST00000340541 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 PRMT8Q9NR22 394 aaPredicted RBP16.31■□□□□ 0.2
VAPA-201ENST00000340541 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
VAPA-201ENST00000340541 F5P12259 2224 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 HELZP42694 1942 aaKnown RBP16.3■□□□□ 0.2
VAPA-201ENST00000340541 FAM92AA1XBS5 289 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 HHLA1C9JL84 531 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 ZNF263O14978 683 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
VAPA-201ENST00000340541 SDHBP21912 280 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 ADORA2BP29275 332 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 TAF10Q12962 218 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
VAPA-201ENST00000340541 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 CELF5Q8N6W0 485 aaKnown RBP16.3■□□□□ 0.2
VAPA-201ENST00000340541 EHBP1Q8NDI1 1231 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 KAT5Q92993 513 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 CYP2S1Q96SQ9 504 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
VAPA-201ENST00000340541 CACNA1AO00555 2505 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
VAPA-201ENST00000340541 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms