RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 APPL2Q8NEU8 664 aa16.21■□□□□ 0.19
MBD1-203ENST00000339998 MAIP1Q8WWC4 291 aa16.21■□□□□ 0.19
MBD1-203ENST00000339998 HESX1Q9UBX0 185 aa16.21■□□□□ 0.19
MBD1-203ENST00000339998 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 CETN2P41208 172 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 NDUFV1P49821 464 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 TAF6P49848 677 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 SCNN1GP51170 649 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 CLCNKBP51801 687 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 ZNF143P52747 638 aaPredicted RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 PITX1P78337 314 aaPredicted RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 ADGRF2Q8IZF7 708 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 FAM172AQ8WUF8 416 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 FAM107BQ9H098 131 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 SNX25Q9H3E2 840 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 TMPRSS4Q9NRS4 437 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 CALCOCO1Q9P1Z2 691 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 WHRNQ9P202 907 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 WDR35Q9P2L0 1181 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 DERAQ9Y315 318 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 TMEM88BA6NKF7 163 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 F8W810 466 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 GNAT1P11488 350 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 RARGP13631 454 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 TM4SF4P48230 202 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 OASLQ15646 514 aaKnown RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 HADHQ16836 314 aaKnown RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 LEKR1Q6ZMV7 388 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 GRK7Q8WTQ7 553 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 Q9Y3F1 56 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 NR2E3Q9Y5X4 410 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 CREB1P16220 341 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 ITIH2P19823 946 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 AXLP30530 894 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 ADCY1Q08828 1119 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 PPP6R3Q5H9R7 873 aaPredicted RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 C1orf228Q6PIY5 440 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 APBB1IPQ7Z5R6 666 aaPredicted RBP16.2■□□□□ 0.18
MBD1-203ENST00000339998 UNC45BQ8IWX7 931 aa16.2■□□□□ 0.18
MBD1-203ENST00000339998 CYB561D2O14569 222 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 ADAMTS4O75173 837 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 POMCP01189 267 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 KCNE1P15382 129 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 FNIP1Q8TF40 1166 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 SLC4A5Q9BY07 1137 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 HMGB1P1B2RPK0 211 aaPredicted RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 HUS1O60921 280 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 KRT7P08729 469 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 SLC6A3Q01959 620 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 ALLCQ8N6M5 410 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 MRRFQ96E11 262 aaKnown RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 RUNDC3BQ96NL0 473 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 CNPY3Q9BT09 278 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 ASNSD1Q9NWL6 643 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 DDX56Q9NY93 547 aaKnown RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 PDCD11Q14690 1871 aaKnown RBP16.19■□□□□ 0.18
MBD1-203ENST00000339998 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
MBD1-203ENST00000339998 M0QZ92 97 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 SEPT4O43236 478 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 CD4P01730 458 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 ANKRD22Q5VYY1 191 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TAF2Q6P1X5 1199 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 KDM7AQ6ZMT4 941 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 AGMOQ6ZNB7 445 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 POLNQ7Z5Q5 900 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 FAM71DQ8N9W8 422 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 FAXDC2Q96IV6 333 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 PPP1R10Q96QC0 940 aaKnown RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 TRAIPQ9BWF2 469 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TSPYL2Q9H2G4 693 aaPredicted RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 PPANQ9NQ55 473 aaKnown RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 TMEM30AQ9NV96 361 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TBK1Q9UHD2 729 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 INPP5FQ9Y2H2 1132 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TRPV2Q9Y5S1 764 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TCRBV7S3A2A0A539 114 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 SHOX2O60902 331 aaPredicted RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 HDAC4P56524 1084 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 PTGISQ16647 500 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 TMEM110Q86TL2 294 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 FUKQ8N0W3 1084 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 CCDC89Q8N998 374 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 CMASQ8NFW8 434 aaPredicted RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
MBD1-203ENST00000339998 PADI3Q9ULW8 664 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 HEY1Q9Y5J3 304 aa16.18■□□□□ 0.18
MBD1-203ENST00000339998 PRPSAP2O60256 369 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 NUDT17P0C025 328 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 NME8Q8N427 588 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 SLC35B2Q8TB61 432 aa16.17■□□□□ 0.18
MBD1-203ENST00000339998 BCAS4Q8TDM0 211 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms