RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TGS1Q96RS0 853 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 SLC5A4Q9NY91 659 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 XPO7Q9UIA9 1087 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 I3L4J1 428 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 KCNN4O15554 427 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 GAS2O43903 313 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 RARBP10826 455 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 GPD1P21695 349 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 RPA3P35244 121 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CCNA1P78396 465 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 SURF1Q15526 300 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 HIF1AQ16665 826 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 HADHQ16836 314 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CCDC14Q49A88 953 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 BSPRYQ5W0U4 402 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 CYP4V2Q6ZWL3 525 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 TAOK1Q7L7X3 1001 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 ARRDC4Q8NCT1 418 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 CCDC110Q8TBZ0 833 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 LPPQ93052 612 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 MAK16Q9BXY0 300 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CNOT10Q9H9A5 744 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 IL1RAPL1Q9NZN1 696 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 BARX2Q9UMQ3 279 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CLUHO75153 1309 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 PLXNB2O15031 1838 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 A0A1B0GUA9 196 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 GLTPD2A6NH11 291 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 PAPSS1O43252 624 aaPredicted RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 WDR4P57081 412 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 CRADDP78560 199 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 RBP5P82980 135 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 C6orf89Q6UWU4 347 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 TP53INP2Q8IXH6 220 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 LINC01465Q8N7H1 131 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 CCDC197Q8NCU1 140 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 SLC35B2Q8TB61 432 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 FBF1Q8TES7 1133 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 DHX35Q9H5Z1 703 aaKnown RBP9.26□□□□□ -0.93
SNCA-201ENST00000336904 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 STRIP2Q9ULQ0 834 aa9.26□□□□□ -0.93
SNCA-201ENST00000336904 E2F8A0AVK6 867 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 MYADML2A6NDP7 307 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 BEST1O76090 585 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 RBL1P28749 1068 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 GBP1P32455 592 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 CDH5P33151 784 aaPredicted RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 MAN1A1P33908 653 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 GRIA1P42261 906 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 NDUFV1P49821 464 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SLC26A2P50443 739 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 GBE1Q04446 702 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 ACTN3Q08043 901 aaPredicted RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 OLIG2Q13516 323 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 DGKDQ16760 1214 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 ANKRD20A8PQ5CZ79 823 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 C3orf62Q6ZUJ4 267 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNCA-201ENST00000336904 FAM131BQ86XD5 332 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SLC2A14Q8TDB8 520 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 HASPINQ8TF76 798 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 PYROXD1Q8WU10 500 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 RMDN2Q96LZ7 410 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 LBHD1Q9BQE6 289 aaPredicted RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 RHOBTB2Q9BYZ6 727 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 RAB6BQ9NRW1 208 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 ETNK2Q9NVF9 386 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SAMD15Q9P1V8 674 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 C2CD4BA6NLJ0 364 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 UGT1A9O60656 530 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 TOP3BO95985 862 aaKnown RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 PAEPP09466 180 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 CA4P22748 312 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 TKTP29401 623 aaKnown RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 GMPRP36959 345 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 YWHAGP61981 247 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNCA-201ENST00000336904 OVGP1Q12889 678 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 DPYSL3Q14195 570 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SLC1A5Q15758 541 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 DUSP28Q4G0W2 176 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 CGB2Q6NT52 195 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 TLK2Q86UE8 772 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.93
SNCA-201ENST00000336904 CCDC185Q8N715 623 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SERPINB12Q96P63 405 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 SNRNP25Q9BV90 132 aaKnown RBP9.25□□□□□ -0.93
SNCA-201ENST00000336904 TRABDQ9H4I3 376 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 UGT1A7Q9HAW7 530 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 UGT1A10Q9HAW8 530 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 UGT1A8Q9HAW9 530 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 CD248Q9HCU0 757 aa9.25□□□□□ -0.93
SNCA-201ENST00000336904 MCF2LO15068 1137 aa9.24□□□□□ -0.93
SNCA-201ENST00000336904 MAGEB2O15479 319 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms