RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 SMG8Q8ND04 991 aaKnown RBP11.05□□□□□ -0.64
AP1S3-201ENST00000334271 OR8H1Q8NGG4 311 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 KAT5Q92993 513 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 RBM18Q96H35 190 aaKnown RBP11.05□□□□□ -0.64
AP1S3-201ENST00000334271 TOX2Q96NM4 488 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 ASB16Q96NS5 453 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 EIF2AQ9BY44 585 aaKnown RBP11.05□□□□□ -0.64
AP1S3-201ENST00000334271 TRIM8Q9BZR9 551 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
AP1S3-201ENST00000334271 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
AP1S3-201ENST00000334271 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 MTHFD1P11586 935 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 SLC1A1P43005 524 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 NSFP46459 744 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 CNGA2Q16280 664 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 C9orf57Q5W0N0 161 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 LRRC57Q8N9N7 239 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 ZNF606Q8WXB4 792 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 ZNF668Q96K58 619 aaPredicted RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 PPP1R10Q96QC0 940 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 CRISPLD2Q9H0B8 497 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 ABCB6Q9NP58 842 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 KRT82Q9NSB4 513 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 KRT19P08727 400 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 CKBP12277 381 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 SKIV2L2P42285 1042 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 TAF6P49848 677 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 ST13P50502 369 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 FAM189BP81408 668 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 MRPS35P82673 323 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 PFKPQ01813 784 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 GABPB1Q06547 395 aaPredicted RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 LPIN1Q14693 890 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 PPP2R5EQ16537 467 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 TMEM86AQ8N2M4 240 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 TMEM176AQ96HP8 235 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 PPP1R16BQ96T49 567 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 RASSF4Q9H2L5 321 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 NXF3Q9H4D5 531 aaKnown RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 RGS18Q9NS28 235 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 KANSL3Q9P2N6 904 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 TTC7AQ9ULT0 858 aaPredicted RBP11.04□□□□□ -0.64
AP1S3-201ENST00000334271 PADI3Q9ULW8 664 aa11.04□□□□□ -0.64
AP1S3-201ENST00000334271 MAP3K7O43318 606 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 CSDE1O75534 798 aaKnown RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SKAP2O75563 359 aaPredicted RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SELPP16109 830 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 POU3F3P20264 500 aaPredicted RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 NOMO3P69849 1222 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 MCOLN2Q8IZK6 566 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 LRRC43Q8N309 656 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SLC35G2Q8TBE7 412 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SLC20A1Q8WUM9 679 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 NT5C1AQ9BXI3 368 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 AMFRQ9UKV5 643 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 THAP12O43422 761 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 MOCS3O95396 460 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 THP07101 528 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 FGFR4P22455 802 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 MCM3P25205 808 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SERPINB3P29508 390 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 PAFAH1B1P43034 410 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 GRIK3Q13003 919 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 RPS6KA1Q15418 735 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 ARHGAP17Q68EM7 881 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SPOPLQ6IQ16 392 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 MON1BQ7L1V2 547 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 CDR2LQ86X02 465 aaPredicted RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 TNIP2Q8NFZ5 429 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 PCDHB18PQ96TA0 734 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 NAP1L3Q99457 506 aaPredicted RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 PLVAPQ9BX97 442 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 WNT8AQ9H1J5 351 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 RNF19AQ9NV58 838 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 CDV3Q9UKY7 258 aaKnown RBP11.03□□□□□ -0.64
AP1S3-201ENST00000334271 CAPN6Q9Y6Q1 641 aa11.03□□□□□ -0.64
AP1S3-201ENST00000334271 PALMO75781 387 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
AP1S3-201ENST00000334271 MMP8P22894 467 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 WARSP23381 471 aaKnown RBP11.02□□□□□ -0.65
AP1S3-201ENST00000334271 RFC2P35250 354 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 RAD23BP54727 409 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 FBXO46Q6PJ61 603 aaPredicted RBP11.02□□□□□ -0.65
AP1S3-201ENST00000334271 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.65
AP1S3-201ENST00000334271 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 ZDHHC17Q8IUH5 632 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 FAM126BQ8IXS8 530 aa11.02□□□□□ -0.65
AP1S3-201ENST00000334271 TNIP3Q96KP6 325 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms