RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MARCOQ9UEW3 520 aaPredicted RBP24.64■■□□□ 1.54
TSKU-201ENST00000333090 FBXO40Q9UH90 709 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 PCSK1NQ9UHG2 260 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 STYXL1Q9Y6J8 313 aa24.64■■□□□ 1.54
TSKU-201ENST00000333090 KLHL33A6NCF5 533 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 TRIM49D1C9J1S8 452 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 MAGEC1O60732 1142 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 AVILO75366 819 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 KITP10721 976 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 KDELR1P24390 212 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 TMPRSS15P98073 1019 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 DPYSL3Q14195 570 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 IZUMO2Q6UXV1 221 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 RIPOR1Q6ZS17 1223 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 SCUBE1Q8IWY4 988 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 THTPAQ9BU02 230 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 SLC38A10Q9HBR0 1119 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 POLIQ9UNA4 740 aa24.64■■□□□ 1.53
TSKU-201ENST00000333090 CCDC195A0A1B0GUA6 201 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 K7ERI5 159 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 KRT7P08729 469 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 RBP3P10745 1247 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 RSBN1LQ6PCB5 846 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 JOSD2Q8TAC2 188 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 TTC1Q99614 292 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 ZNF395Q9H8N7 513 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 TJP2Q9UDY2 1190 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 EFR3BQ9Y2G0 817 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 ANKRD33BA6NCL7 494 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 ANPEPP15144 967 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 BST1Q10588 318 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 MTHFD1LQ6UB35 978 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 PRPF39Q86UA1 669 aaKnown RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 PPM1NQ8N819 430 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 CFAP36Q96G28 342 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 ACAP3Q96P50 834 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 CISHQ9NSE2 258 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 KCNK4Q9NYG8 393 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 CTDP1Q9Y5B0 961 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 CNTNAP2Q9UHC6 1331 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 RGPD3A6NKT7 1758 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 RGPD4Q7Z3J3 1758 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 CAPN14A8MX76 684 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 CIB2O75838 187 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 BAG2O95816 211 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 PSAPP07602 524 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 ASNSP08243 561 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 KRT3P12035 628 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 EN1Q05925 392 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 EMC2Q15006 297 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 HADHQ16836 314 aaKnown RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 HSF5Q4G112 596 aaPredicted RBP24.63■■□□□ 1.53
TSKU-201ENST00000333090 C6orf163Q5TEZ5 329 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 KIAA0319LQ8IZA0 1049 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 TFAP2BQ92481 460 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 PDP2Q9P2J9 529 aa24.63■■□□□ 1.53
TSKU-201ENST00000333090 COL4A5P29400 1685 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 F8W8V4 182 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 MCF2LO15068 1137 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 NBPF20Q3BBV1 942 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 FAM91A1Q658Y4 838 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 SCARA5Q6ZMJ2 495 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 EMC1Q8N766 993 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 KCTD6Q8NC69 237 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 DEPTORQ8TB45 409 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 PANX3Q96QZ0 392 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 KLF11O14901 512 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 DKC1O60832 514 aaKnown RBP eCLIP24.62■■□□□ 1.53
TSKU-201ENST00000333090 IL1BP01584 269 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 WEE2P0C1S8 567 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 TSHRP16473 764 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 SLFN12LQ6IEE8 588 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 ULK2Q8IYT8 1036 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 UBR7Q8N806 425 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 FLAD1Q8NFF5 587 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 SPATA18Q8TC71 538 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 CALN1Q9BXU9 219 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 FRMD8P1Q9BZ68 369 aaPredicted RBP24.62■■□□□ 1.53
TSKU-201ENST00000333090 SLC13A1Q9BZW2 595 aa24.62■■□□□ 1.53
TSKU-201ENST00000333090 LDHAP00338 332 aaKnown RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 LYNP07948 512 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 DSG1Q02413 1049 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 TAF5Q15542 800 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 GSTA3Q16772 222 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 SLC25A41Q8N5S1 370 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 HSPH1Q92598 858 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 NDE1Q9NXR1 346 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 TEX264Q9Y6I9 313 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 ZNF646O15015 1829 aaPredicted RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 RTN3O95197 1032 aaPredicted RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 ASS1P00966 412 aaKnown RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 MYL6P60660 151 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 BAATQ14032 418 aaPredicted RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 C1orf146Q5VVC0 180 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 NET1Q7Z628 596 aaPredicted RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 SLC26A11Q86WA9 606 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 MAP3K20Q9NYL2 800 aaKnown RBP24.61■■□□□ 1.53
TSKU-201ENST00000333090 SLC7A8Q9UHI5 535 aa24.61■■□□□ 1.53
TSKU-201ENST00000333090 SPECC1L-ADORA2AF8WAN1 911 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 TM7SF2O76062 418 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms