RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 C11orf57Q6ZUT1 292 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-201ENST00000332345 GPIHBP1Q8IV16 184 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ARHGEF19Q8IW93 802 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 UBR7Q8N806 425 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ANKRD52Q8NB46 1076 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ZMIZ2Q8NF64 920 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ANKRD20A12PQ8NF67 263 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 SCAMP5Q8TAC9 235 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 IRF7Q92985 503 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 FBXO32Q969P5 355 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 MFSD1Q9H3U5 465 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 TRPC7Q9HCX4 862 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 TDP1Q9NUW8 608 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 FANCLQ9NW38 375 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 THG1LQ9NWX6 298 aaKnown RBP14.82□□□□□ -0.04
LIMS1-201ENST00000332345 IL37Q9NZH6 218 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 HESX1Q9UBX0 185 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 OBSL1O75147 1896 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 NUP210Q8TEM1 1887 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-201ENST00000332345 ZNF840PA6NDX5 716 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 TADA3O75528 432 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 HDCP19113 662 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
LIMS1-201ENST00000332345 ACO1P21399 889 aaKnown RBP14.81□□□□□ -0.04
LIMS1-201ENST00000332345 PON1P27169 355 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 GRM2Q14416 872 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 SLC44A4Q53GD3 710 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 MIIPQ5JXC2 388 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 CDKAL1Q5VV42 579 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 SMYD5Q6GMV2 418 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 SUGP1Q8IWZ8 645 aaKnown RBP14.81□□□□□ -0.04
LIMS1-201ENST00000332345 SIX5Q8N196 739 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 KAT5Q92993 513 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 SHDQ96IW2 340 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 CYP2S1Q96SQ9 504 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 KIF9Q9HAQ2 790 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 APEX2Q9UBZ4 518 aa14.81□□□□□ -0.04
LIMS1-201ENST00000332345 CHORDC1Q9UHD1 332 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-201ENST00000332345 FAM92AA1XBS5 289 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 SMTNL1A8MU46 457 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 RNF225M0QZC1 329 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 STK25O00506 426 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 CHADO15335 359 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 CKMP06732 381 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 RFX1P22670 979 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 GDI1P31150 447 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 ZNF268Q14587 947 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 STILQ15468 1287 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 CNGA2Q16280 664 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 ANO6Q4KMQ2 910 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 ARHGAP29Q52LW3 1261 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 FBXL6Q8N531 539 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 ARL14EPQ8N8R7 260 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 BPIFB1Q8TDL5 484 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 DNASE1L2Q92874 299 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 USP13Q92995 863 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 TRPV5Q9NQA5 729 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 TLR8Q9NR97 1041 aaKnown RBP14.8□□□□□ -0.04
LIMS1-201ENST00000332345 CA14Q9ULX7 337 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 CNTN6Q9UQ52 1028 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 SCML2Q9UQR0 700 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 NCANO14594 1321 aa14.8□□□□□ -0.04
LIMS1-201ENST00000332345 C2orf78A6NCI8 922 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 HHLA1C9JL84 531 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 PRAMEF12O95522 483 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 KRT5P13647 590 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 BCAT1P54687 386 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 PRKCQQ04759 706 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 FCHO2Q0JRZ9 810 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 GOLGA7BQ2TAP0 167 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 HECTD3Q5T447 861 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 SNX30Q5VWJ9 437 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 RSPRY1Q96DX4 576 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 BPIFA3Q9BQP9 254 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 SMG9Q9H0W8 520 aaKnown RBP14.79□□□□□ -0.04
LIMS1-201ENST00000332345 VPS16Q9H269 839 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 ARHGEF3Q9NR81 526 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 TSPAN16Q9UKR8 245 aa14.79□□□□□ -0.04
LIMS1-201ENST00000332345 KRBA1A5PL33 1030 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 LRRC10BA6NIK2 292 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 O00370 1275 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 CLCN5P51795 746 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 KIF11P52732 1056 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 BST2Q10589 180 aaKnown RBP14.78□□□□□ -0.04
LIMS1-201ENST00000332345 KRT31Q15323 416 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 ARHGAP44Q17R89 818 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 FKBP15Q5T1M5 1219 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 CC2D1AQ6P1N0 951 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-201ENST00000332345 FLCNQ8NFG4 579 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 CSGALNACT1Q8TDX6 532 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 SLC22A12Q96S37 553 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 TAB2Q9NYJ8 693 aa14.78□□□□□ -0.04
LIMS1-201ENST00000332345 GMIPQ9P107 970 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms