RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 LMCD1Q9NZU5 365 aa18.65■□□□□ 0.58
PRKCB-202ENST00000321728 PCNTO95613 3336 aa18.64■□□□□ 0.58
PRKCB-202ENST00000321728 CALB1P05937 261 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 WEE2P0C1S8 567 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 STIP1P31948 543 aaKnown RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SDCCAG8Q86SQ7 713 aaPredicted RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SPATA24Q86W54 205 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 NUDCD3Q8IVD9 361 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SLC26A7Q8TE54 656 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 FAM172AQ8WUF8 416 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 HIC2Q96JB3 615 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 CCDC106Q9BWC9 280 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 PTPRJQ12913 1337 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 TXNDC9O14530 226 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 CYB561D2O14569 222 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 VNN1O95497 513 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 PABPC4LP0CB38 370 aaKnown RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 GARTP22102 1010 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 PDE1BQ01064 536 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 USP4Q13107 963 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 PIGHQ14442 188 aaPredicted RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SFT2D3Q587I9 215 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 PPP1R2P3Q6NXS1 205 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 NMD3Q96D46 503 aaKnown RBP18.64■□□□□ 0.57
PRKCB-202ENST00000321728 MIS12Q9H081 205 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SOX13Q9UN79 622 aa18.64■□□□□ 0.57
PRKCB-202ENST00000321728 SLC25A3Q00325 362 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 HNRNPDQ14103 355 aaKnown RBP18.63■□□□□ 0.57
PRKCB-202ENST00000321728 MAP7Q14244 749 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 EFHC1Q5JVL4 640 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 FAM182AQ5T1J6 154 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 TTC39BQ5VTQ0 682 aaPredicted RBP18.63■□□□□ 0.57
PRKCB-202ENST00000321728 SATL1Q86VE3 508 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 CPXCR1Q8N123 301 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 STKLD1Q8NE28 680 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 PLLPQ9Y342 182 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 A0A088AWK7 358 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 PDLIM1O00151 329 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 EXTL3O43909 919 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 AVILO75366 819 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 TSHRP16473 764 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 LIG4P49917 911 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 EPHB1P54762 984 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 MAP3K10Q02779 954 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRKCB-202ENST00000321728 PABPC1LQ4VXU2 614 aaKnown RBP18.63■□□□□ 0.57
PRKCB-202ENST00000321728 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 CYP4A22Q5TCH4 519 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 CES4AQ5XG92 561 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 KYAT3Q6YP21 454 aaKnown RBP18.63■□□□□ 0.57
PRKCB-202ENST00000321728 ANO5Q75V66 913 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 SLC26A11Q86WA9 606 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 TTC13Q8NBP0 860 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 CEP170P1Q96L14 293 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 TBC1D22BQ9NU19 505 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 ETNK2Q9NVF9 386 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
PRKCB-202ENST00000321728 KRT37O76014 449 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 C6orf222P0C671 652 aaPredicted RBP18.62■□□□□ 0.57
PRKCB-202ENST00000321728 UQCRBP14927 111 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 VAV1P15498 845 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 GRIA2P42262 883 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 AQP4P55087 323 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 NLRP11P59045 1033 aaKnown RBP18.62■□□□□ 0.57
PRKCB-202ENST00000321728 TBCCQ15814 346 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 MMEL1Q495T6 779 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 HIPK4Q8NE63 616 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 EBF4Q9BQW3 602 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 KLHL4Q9C0H6 718 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 CLIC5Q9NZA1 410 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 TBC1D30Q9Y2I9 924 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 TMX2Q9Y320 296 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 NUB1Q9Y5A7 615 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 C3orf70A6NLC5 250 aaPredicted RBP18.62■□□□□ 0.57
PRKCB-202ENST00000321728 NFIBO00712 420 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 EIF3EP60228 445 aaKnown RBP18.62■□□□□ 0.57
PRKCB-202ENST00000321728 MRPS9P82933 396 aaKnown RBP18.62■□□□□ 0.57
PRKCB-202ENST00000321728 DPYSL3Q14195 570 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 PSMD6Q15008 389 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 ZNF394Q53GI3 561 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 AAGABQ6PD74 315 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 ANKEF1Q9NU02 776 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 SLC9A2Q9UBY0 812 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 PPME1Q9Y570 386 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 LY75O60449 1722 aa18.62■□□□□ 0.57
PRKCB-202ENST00000321728 UBR3Q6ZT12 1888 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 OR6B1O95007 311 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 SERPINA6P08185 405 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 VCLP18206 1134 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 PSMA2P25787 234 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 SH3BGRP55822 239 aaPredicted RBP18.61■□□□□ 0.57
PRKCB-202ENST00000321728 DLG1Q12959 904 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 GDPD5Q8WTR4 605 aa18.61■□□□□ 0.57
PRKCB-202ENST00000321728 CCDC124Q96CT7 223 aaKnown RBP18.61■□□□□ 0.57
PRKCB-202ENST00000321728 NTPCRQ9BSD7 190 aaKnown RBP18.61■□□□□ 0.57
PRKCB-202ENST00000321728 C1orf21Q9H246 121 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms