RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 CYP4F22Q6NT55 531 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CXCL17Q6UXB2 119 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 BBS12Q6ZW61 710 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CROCCP2Q86T23 111 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 UNC93AQ86WB7 457 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 TAB3Q8N5C8 712 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 ARRDC4Q8NCT1 418 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 SELENOSQ9BQE4 189 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 MAK16Q9BXY0 300 aaKnown RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 NINJ2Q9NZG7 142 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 TPX2Q9ULW0 747 aaKnown RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 ANKRD65E5RJM6 399 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 EBAG9O00559 213 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 DNALI1O14645 258 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 PAPSS1O43252 624 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 CA12O43570 354 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 GABBR2O75899 941 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 PGK1P00558 417 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 AGTP01019 485 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 FGFR1P11362 822 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 PECAM1P16284 738 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 INHBEP58166 350 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 CCDC14Q49A88 953 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 OLFML1Q6UWY5 402 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 TMEM110Q86TL2 294 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 NME8Q8N427 588 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 TTC13Q8NBP0 860 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 SMG8Q8ND04 991 aaKnown RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 APPL2Q8NEU8 664 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 KBTBD7Q8WVZ9 684 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 TMEM109Q9BVC6 243 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 ROPN1BQ9BZX4 212 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 SNX25Q9H3E2 840 aa7.93□□□□□ -1.14
IFT88-201ENST00000319980 ROPN1Q9HAT0 212 aaPredicted RBP7.93□□□□□ -1.14
IFT88-201ENST00000319980 GOLGA8MH3BSY2 632 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 XPOTO43592 962 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 SDC4P31431 198 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TAF6P49848 677 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SLC6A3Q01959 620 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FAM47CQ5HY64 1035 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FAM228AQ86W67 206 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ZCCHC9Q8N567 271 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 SPATA18Q8TC71 538 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 RSAD2Q8WXG1 361 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CCT8L2Q96SF2 557 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 RSAD1Q9HA92 442 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CTNNAL1Q9UBT7 734 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 MEIS3P2A8K0S8 358 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 APOC4-APOC2K7ER74 178 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 HUS1O60921 280 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 DUSP11O75319 330 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 APOC2P02655 101 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CTSHP09668 335 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 RBP3P10745 1247 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 LCP1P13796 627 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 KCNE1P15382 129 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CHN1P15882 459 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 MAGEA4P43358 317 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 LILRA4P59901 499 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 EIF3EP60228 445 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 TAZQ16635 292 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FAM182AQ5T1J6 154 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TAF2Q6P1X5 1199 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 NPNTQ6UXI9 565 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CYP4V2Q6ZWL3 525 aaPredicted RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 ZC3H18Q86VM9 953 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 NLRP14Q86W24 1093 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TRPV1Q8NER1 839 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 MYCBPAPQ8TBZ2 947 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SLC2A14Q8TDB8 520 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CLEC4CQ8WTT0 213 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FAM172AQ8WUF8 416 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 KHSRPQ92945 711 aaKnown RBP eCLIP7.92□□□□□ -1.14
IFT88-201ENST00000319980 ZNF560Q96MR9 790 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 ARHGAP39Q9C0H5 1083 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 STMN4Q9H169 189 aaPredicted RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 CNOT10Q9H9A5 744 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 PCDH9Q9HC56 1237 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SAYSD1Q9NPB0 183 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 GPATCH2LQ9NWQ4 482 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SAGE1Q9NXZ1 904 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 CACNG4Q9UBN1 327 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TBK1Q9UHD2 729 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SCN1AP35498 2009 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 GMNCA6NCL1 334 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 FOXO6A8MYZ6 492 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 M0QZ92 97 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 TRAPPC3O43617 180 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SLC10A3P09131 477 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 SETSIPP0DME0 302 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 HSPA1AP0DMV8 641 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 HSPA1BP0DMV9 641 aaKnown RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 IGFBP6P24592 240 aaPredicted RBP7.92□□□□□ -1.14
IFT88-201ENST00000319980 PNPLA4P41247 253 aa7.92□□□□□ -1.14
IFT88-201ENST00000319980 MMP13P45452 471 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms